Pseudomonas fluorescens SF39a, NX10_RS24355
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR34308
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0009236 | cobalamin biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR34308
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0048472 | threonine-phosphate decarboxylase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR34308
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR00380 | JCVI: adenosylcobinamide-phosphate synthase CbiB | IPR004485 | Cobalamin biosynthesis CobD/CbiB | 8 | 256 | 2.0E-55 |
| Pfam | PF17113 | Regulatory signalling modulator protein AmpE | IPR031347 | Protein AmpE | 132 | 223 | 3.3E-7 |
| Pfam | PF03186 | CobD/Cbib protein | IPR004485 | Cobalamin biosynthesis CobD/CbiB | 8 | 282 | 4.3E-96 |
| Hamap | MF_00024 | Cobalamin biosynthesis protein CbiB [cbiB]. | IPR004485 | Cobalamin biosynthesis CobD/CbiB | 1 | 302 | 109.052879 |
| PANTHER | PTHR34308 | COBALAMIN BIOSYNTHESIS PROTEIN CBIB | IPR004485 | Cobalamin biosynthesis CobD/CbiB | 4 | 296 | 1.4E-101 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.