Pseudomonas fluorescens SF39a, NX10_RS23175
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0000160 | phosphorelay signal transduction system |
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00563 | EAL domain | IPR001633 | EAL domain | 142 | 375 | 3.0E-51 |
| SUPERFAMILY | SSF52172 | CheY-like | IPR011006 | CheY-like superfamily | 1 | 129 | 9.82E-22 |
| SMART | SM00448 | REC_2 | IPR001789 | Signal transduction response regulator, receiver domain | 4 | 121 | 8.0E-11 |
| Pfam | PF00072 | Response regulator receiver domain | IPR001789 | Signal transduction response regulator, receiver domain | 7 | 119 | 4.1E-18 |
| CDD | cd01948 | EAL | IPR001633 | EAL domain | 144 | 381 | 7.2357E-70 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 2 | 134 | 1.8E-24 |
| Gene3D | G3DSA:3.20.20.450 | EAL domain | IPR035919 | EAL domain superfamily | 140 | 390 | 1.4E-66 |
| SMART | SM00052 | duf2_2 | IPR001633 | EAL domain | 136 | 381 | 9.1E-58 |
| SUPERFAMILY | SSF141868 | EAL domain-like | IPR035919 | EAL domain superfamily | 143 | 387 | 2.62E-64 |
| PANTHER | PTHR33121 | CYCLIC DI-GMP PHOSPHODIESTERASE PDEF | - | - | 125 | 386 | 7.5E-63 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.