Pseudomonas fluorescens SF39a, NX10_RS05960

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain SF39a contig_2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCAGATCGCGCCGCCGCGCACGCTTTACGAAGAGCCGAAAAACACCTTTGTCGCCAACTTCATCGGCGAGAACAACCGTCTCAACGGCCGCCTGCTCAG CCAGAGCGGCGAGCGTTGCGTGGTCGAACTGGGCCGTGGCGAAAAGGTCGAGGCGCTGGCGGTCAACGTCGGCCAGACCGGCGAGCCAGTGACCCTGTCG ATCCGTCCGGAGCGCGTCAGTCTCAACGGTTCGAGCGATCAATGCGTCAACCGCTTCTCAGGGAGGGTGGCGGAATTCATCTATCTGGGCGACCACGTCC GGGTGCGCCTGGAAGTCTGCGGCAAGACCGACTTCTTCGTGAAGCAACCGATTGCCGAGCTCGATCCCGCGCTCGCTGTCGGCGACGTGGTTCCGCTTGG CTGGCAGGTCGAGCACGTTCGCGCGCTTGATCCGCTTTTAGAGGCGCACTAAGCGCCCCGGCAATACCAACACCAATCCTGCACGTGGAGAGAACAATAA
DNA Sequence for Gene
>NX10_RS05960
ATGTTGAGATCCCTGAAGTTCACCGCCCTGACTCTGGGCCTGATGGGTGCGACCGGCGCGATGGCCGCCGGCCCGGACTTGACCGTGGTGTCGTTTGGCG GGGCGAACAAGGCGGCGCAAGTCAAAGCCTTCTATGCACCCTGGGAAGCGGCGGGTAACGGCAAGATCGTTGCCGGTGAATACAACGGCGAGATGGCCAA GGTCAAAGCCATGGTCGACACCAAGAGCGTGTCCTGGGACCTGGTCGAAGTTGAATCGCCAGAGCTGTCCCGTGGTTGCGACGAAGACATGTTCGAGCAG CTTGATCCTGCGCTGTTCGGCAAGACCGAAGACTACGTCAAAGGCGCCATTCAGCCGTGCGGCGTAGGTTTCTTCGTCTGGTCGACCGTGCTGGCTTACA ACGCCGACAAGCTGAAAACCGCACCGACCAGTTGGGCGGATTTCTGGGACACGAAGAAATTCCCGGGCAAGCGCGGCCTGCGCAAAGGCGCCAAGTACAC CCTCGAATTCGCGCTGATGGCCGATGGTGTGGCGCCGAAAGACGTCTACAAGGAGCTGGCGAGCAAGGGCGGCCAGGATCGGGCGTTCAAGAAACTCGAT GAGCTCAAGCCAAGCATTCAGTGGTGGGAAGCCGGCGCGCAACCGCCGCAATACCTCGCTTCCGGCGACGTGGTAATGAGTTCGGCCTACAACGGTCGCA TCGCTGCGGTGCAGAAAGAATCCAACCTGAAAGTCGTGTGGAACGGCGGCATCTACGACTTCGACGCCTGGGCCATCCCGAAAGGCCTGGACGCCAAGCG CGCGGAAGCGGCGAAGAAATTCATCGCCTTCTCGGTGCAGCCGCAGCAGCAGAAGACCTACTCGGAAAACATCGCCTACGGCCCGGCCAACACCCAGGCT GTGCCGCTGCTGGCCAAGGATGTCCTGAAAGACATGCCAACCACCCCGGAAAACATCGCCAACCAGGTGCAGATCGACGTCAGCTTCTGGGCTGACAACG GCGAGCAACTGGAGCAGCGCTTCAATTCCTGGGCGGCGAAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCACTGTTTTACCTGTATGGAGATGGCAAGGGCGCTTTTGTGGCGAGGGGATTTATCCCCGTTGGGTTGCGAAGCAGCCCCGAAGCCATACCCGCTCGGT GGGTCAGGTAAACCGCATTCTCAGGTTTTACGACTGCTGCGCAGCCGAACGGGGATAAGTCCCCTCGCCACAAAGGTTCGCTGCCACAGAAAGGCTCGCT CCCACAGGTAGCAGTGTTTCAACGCAACAGAGGTGGTTCGCCACCTCTGTAACGATCAAAGATTTGCGGAGTACGTCATGGCCATCGCCGTTCCCCTGAA CGAGGGCGCCAGCCCCACCTTGAAGCAGAAGCTCAAGCGCGCCGAGCGGGTCAACCGCTGGAAGGCTCAAGCGCTGATTGCGCCGCTGGTGCTGTTTCTA CTGCTGGTGTTTCTGGTGCCGATCGTGGCGCTGCTCTACAAAAGCGTCGGCAACCCGGAAGTGGTTGGCGGCATGCCGCGCACTGTCACCGCCATCGCCA
Amino Acid Sequence
>spermidine/putrescine ABC transporter substrate-binding protein
MLRSLKFTALTLGLMGATGAMAAGPDLTVVSFGGANKAAQVKAFYAPWEAAGNGKIVAGEYNGEMAKVKAMVDTKSVSWDLVEVESPELSRGCDEDMFEQ LDPALFGKTEDYVKGAIQPCGVGFFVWSTVLAYNADKLKTAPTSWADFWDTKKFPGKRGLRKGAKYTLEFALMADGVAPKDVYKELASKGGQDRAFKKLD ELKPSIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKESNLKVVWNGGIYDFDAWAIPKGLDAKRAEAAKKFIAFSVQPQQQKTYSENIAYGPANTQA VPLLAKDVLKDMPTTPENIANQVQIDVSFWADNGEQLEQRFNSWAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site