Pseudomonas fluorescens SF39a, NX10_RS05840

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain SF39a contig_2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCGTCTGTACTAATACACAGACATTCGTAGCAAGCTTCTTGCCTAAGCCCGGCCCTCAGCCGGGCTAATGGCATTTGCGTAAAACGCTTGATGCTTCAC CGTCGACGCCGCCGATGCGACCGAGACAAATCTGCTTCACCGCGTCAGGCCTGGCTCTTTTGCCAGCGGTGCACGTCTTTTCTGACGAGCCTTTCAAGGC TACTGACGAGCACACCCACTGATTCCTCTTACGACGATCAGCCCAAGGCACCTGCATGCGTGCCCGCTTTATTGAGCTATCCGAGGCCGACAACCGGCCG TCAGCGGATTCAGCGCAACACTTTCACATAGTCGAAGACTGATAGGTACTAACGTCAGTGGATTTTCGGCAGATACACTTCCCGACAGCGATCACGCAGA CGACACCGGTCGAGCCGCACTTTTTGTGCGTTTCCAGCAATGGCCCGCGTCCGACAGCCTGTCGCAACGGACCTATTGCAGCGCAGACGACGAGAACGCC
DNA Sequence for Gene
>NX10_RS05840
ATGGCCGGGCTGATTCCCCAGAGCTTCATTGACGACCTGCTGAACCGCACCGACATCGTCGACGTGGTCAGCTCGCGCGTGCAATTGAAGAAGGCCGGCA AGAACTACACCGCCTGTTGCCCGTTCCACAAAGAGAAAACCCCGTCGTTCAGTGTCAGCCCCGACAAACAGTTCTATTACTGCTTCGGCTGCGGCGCTGG CGGCAACGCCCTCGGCTTTCTCATGGATCACGACAACCTGGACTTCCCCCAGGCCGTCGAAGATCTGGCCAAAGCCGCCGGCATGGAAATCCCTCGCGAA GAAAGCGGTCGCGAGCGCAAGCCGCGTCAGCCGACCGATTCGCCGCTGTATCCGCTGCTCACCGCCGCCGCCGATTTCTACCGGCAGGCGCTCAAGAGTC ATCCGTCGCGCAAGGCTGCGGTGGATTACCTCAAGGGGCGCGGCCTGACCGGCGAGATCGCTCGGGATTTCGGCCTCGGCTTTGCGCCGCCGGGCTGGGA CAACCTGCTCAAGCATCTGAGTAGCGACACGTTGCAACAGAAGGCCATGATTGAAGCCGGCCTGCTGATCGAGAACGCCGAAACCGGCAAACGCTATGAT CGCTTTCGTGATCGCGTGATGTTCCCGATCCGCGACACCCGTGGACGGATCATCGCCTTCGGCGGTCGCGTACTGGGCGACGATAAGCCCAAGTACCTGA ACTCACCGGAAACCCCGGTATTCCATAAAGGCCAGGAACTCTACGGCCTTTATGAAGCGCGCAAGAACAATCGCAACCTTGACGAGATCATTGTCGTCGA AGGCTACATGGACGTCATCGCCCTCGCCCAGCAAGGCCTGCGCAATGCCGTCGCCACGCTGGGCACCGCCACCAGCGAAGAACATTTGAAGCGTCTGTTT CGCGTCGTCCCGAACGTATTGTTCTGCTTCGATGGCGACCAGGCCGGCCGCAACGCCGCGTGGCGCGCACTGGAAGCGACCCTGCCGTGCCTGCAGGACG GTCGTCGCGCGCGATTCCTGTTTTTGCCCGAAGGCGAAGACCCGGACACCCTGGTTCGCGCCGAAGGCACTGACGCATTCAAGGCGCGCATCAATCAGCA TGCGCAGCCGCTGGCCGATTATTTTTTCCAGCAACTGACCGAAGAAGCCGACCCGCGCTCGCTCGAGGGCAAGGCGCACATGGCTACCCTCGCTGCACCG CTGATCGACAAGGTGCCGGGGGCGAACCTGCGCATCCTCATGCGTAAGCGCCTGACCGAGATTACCGGCCTGAGCAGCGAGACCGTCAGCCAATTGGTTC AGAGTGCGCCGCAGGAAGCACCGCCCGCCTACGATCCGGGCTTCGATTACGACGCCATACCGGATTACAGCGACTACCATCAGCCGCAGGCACAGGACAT GTACGTGCCGCAGCAGGAATGGACGCCGAAGAAACCCGGCGCCGGCGGCAAGAAGTGGGACAAGAAACCGTGGGACAAGAACGGCAAGCGTGGCGGCGAT CGCGAACAGCAGCGCCCGCGCACGCCGATTGGCGTCGAATCGCCGACCCTGACGGCCCTTAGAACATTGCTCCATCATCCGCAACTGGCCAAGCGCGTCG AAGACGCCGGGCACATTGCCGATGAAAATCAGACCAACGCCCAGTTGCTTGTGGCACTGCTCGAAGCCGTACAGAAGAATCCCAAGCTAAACTCATTTCA GTTGATCGCGCGGTGGCACGGTACTGAACAGGGTCGTTTGCTCAAGGCACTGGCAGAAAAGGAATGGCTGATTGACGGAGATAACCTTGAACAACAGTTT TTCGACACCATTACTAGCTTGTCCGCCCGCCAACGCGAGCGAAATCTCGAACAGTTACTCAGGAAAGCGCGGCAAAGCGAACTGAGCGTCGAAGAGAAAA ATCAACTGCGCGACCTTTTAAGTCGCAATGTTTCCGCATCAAACCCGACCTCAACTGGCGCGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTCATAGCTCAGGTATAATCCTCGGCTTGTTTTTTGCCCGCCAAGACCTTCAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAGCAGTCTCGTATT ATTGAGTTGATCAAACTGGGTCGTGAGCAGAAGTATCTGACTTACGCCGAGGTCAACGACCACCTGCCCGAGGATATTTCAGATCCGGAGCAGGTGGAAG ACATCATCCGCATGATTAACGACATGGGGATCCCCGTACACGAGAGTGCTCCGGATGCGGACGCCCTTATGTTGGCCGACGCCGATACCGACGAGGCCGC TGCGGAAGAAGCAGCCGCTGCGTTGGCGGCGGTGGAGACCGATATCGGTCGCACCACTGACCCGGTGCGCATGTACATGCGTGAAATGGGTACGGTCGAG CTTCTGACCCGTGAAGGCGAAATCGAAATCGCCAAGCGGATCGAAGAAGGCATTCGTGAAGTGATGAGCGCAATCGCGCACTTCCCTGGCACGGTTGACC
Amino Acid Sequence
>DNA primase
MAGLIPQSFIDDLLNRTDIVDVVSSRVQLKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFGCGAGGNALGFLMDHDNLDFPQAVEDLAKAAGMEIPRE ESGRERKPRQPTDSPLYPLLTAAADFYRQALKSHPSRKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLLKHLSSDTLQQKAMIEAGLLIENAETGKRYD RFRDRVMFPIRDTRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLYEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF RVVPNVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVRAEGTDAFKARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAP LIDKVPGANLRILMRKRLTEITGLSSETVSQLVQSAPQEAPPAYDPGFDYDAIPDYSDYHQPQAQDMYVPQQEWTPKKPGAGGKKWDKKPWDKNGKRGGD REQQRPRTPIGVESPTLTALRTLLHHPQLAKRVEDAGHIADENQTNAQLLVALLEAVQKNPKLNSFQLIARWHGTEQGRLLKALAEKEWLIDGDNLEQQF FDTITSLSARQRERNLEQLLRKARQSELSVEEKNQLRDLLSRNVSASNPTSTGA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site