Strain | Pseudomonas fluorescens strain SF39a contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCGCCGCCGCCGTGGAGCAATTGCAGGTCTGGGGCGAGCGCAACAAGATTCCGGTGATCGCCCAGCACACCGGCGCCGATTCGGCTTCGGTCATCTTCG ACGCGGTGCAAGCGGCCAAGGCCCGTGGTATCGACGTTTTGATCGCTGACACCGCCGGTCGCCTGCACACCAAAGACAACCTGATGGAAGAGCTGAAAAA GGTCCGCCGGGTGATCGGCAAGCTCGACGCCGACGCGCCGCACGAAGTGCTGCTGGTGCTCGACGCCGGCACTGGCCAGAACGCCATCAACCAGGCCAAG CAGTTCAATCAGACTGTCGAACTGACCGGCCTGGCCCTGACCAAGCTCGACGGCACCGCCAAGGGCGGGGTGATTTTCGCCCTGGCCAAGCAGTTCGGTC TGCCGATCCGCTACATCGGCGTCGGTGAAGGCATCGACGATTTGCGTACCTTTGAAGCCGAACCCTTTGTCCAGGCGCTGTTTGCCGAGCGGGAGCGTTC
|
|
DNA Sequence for Gene |
>NX10_RS04965
ATGATTCGTTTCGAACAGGTCGGTAAACGCTACCCGAACGGTCACGTCGGCTTGCATGAGCTGAGCTTTCGAGTCCGTCGTGGCGAGTTCTTGTTTGTCA CCGGTCACTCCGGTGCCGGTAAATCCACGCTGTTGCGCCTGTTGTTGGCAATGGAGCGGCCGACCAGCGGCAAACTGCTGCTCGCCGGGCAAGACCTGAG CACCATCAGCAACGCGCAGATTCCGTTTCTGCGCCGACAGATCGGCGTGGTGTTCCAGAATCACCAGTTGCTGTTCGACCGCACGGTGTTCAACAACGTC GCCTTGCCACTGCAGATTCTCGGCCTGTCCAAGGTCGAGATTGCCAAGCGCGTCGATTCGGCGCTGGAGCGCGTGGCACTGTCGGACAAATCCGATCTGT ACCCGGGCGACCTGTCCACCGGTCAGCAACAGCGCGTCGGCATCGCCCGCGCCATCGTCCACCGCCCGGCCTTGCTGCTGGCGGACGAACCGACCGGTAA CCTCGACCCGCGTCTGGCGGCGGAGATCATGGGCGTGTTCGAAGACATCAACCGCTTGGGCACCAGCGTGCTGATCGCCAGTCACGACCTGGCGCTGATC GCGCGCATGCGTCATCGCATGCTGACCCTGCAACGCGGCCGCCTGATCGGCGACGGGGAGGCCGGGGTATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GTGCGACACGCAGTCCGAAGGTTTCCGAGCGTGTGGCCCCGAAGGCCGCCGACCCGCAACCGCAAAAGAAGAAAAAGCACGACGATGACGATGGCCCGGA CTTCGCCACGCTGTTTCACGCCTGGATCGAAAGCCATCGCGCCAGCCTGCTCGACAGCCTGCGCCGCCTCGGCAAACAGCCGATCGGCAGCTTCTTCACC TGCATGGTGATGGCCGTGGCCTTGAGCTTGCCGATGGGTCTGTCGCTGCTGCTGAACAATGTCGAACGTCTCGGCGGCTCGTGGCAGCGTGCGGCGCAGA TCTCGCTGTACCTGCAGCTCGACGCGACGCCAGCACAGGGCGAGTCGTTGCGCGAGCAGATCAAAGGCATGCCTGGCGTAGCCGATGCCGAATATGTCGG CCGCGATCAGGCGCTGGAGGAGTTCCAGCAGCAGTCCGGCCTGGGCGAAGCCCTGCGTGAGCTGCCGGAAAACCCTTTGCCCGGTGTAGTGCTGGTGACA
|
|
Amino Acid Sequence |
>cell division protein FtsE
MIRFEQVGKRYPNGHVGLHELSFRVRRGEFLFVTGHSGAGKSTLLRLLLAMERPTSGKLLLAGQDLSTISNAQIPFLRRQIGVVFQNHQLLFDRTVFNNV ALPLQILGLSKVEIAKRVDSALERVALSDKSDLYPGDLSTGQQQRVGIARAIVHRPALLLADEPTGNLDPRLAAEIMGVFEDINRLGTSVLIASHDLALI ARMRHRMLTLQRGRLIGDGEAGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|