Pseudomonas fluorescens SF39a, NX10_RS04495
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain SF39a contig_2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCTGCTCGGGCGCAGTTGCGCCGGGGCCGGCTTCGATCACGAAGGCTGGCTGATCGACGCCGCCGAACTGCTCGAAGGCGATATCCAGGATAACGTCCG CAACGCCCTGATCGGCCTGCAGGAGATGGTCAAGGGCGAGCTGACCGGCGACGACGTCACTGTCGTGCTTCTGCTGCCGACCGACGATGCGCCGCTGGCC GACCGCGCTGCTGCACTGGGCGAGTGGTGCCAGGGCTTCCTCAGCGGGTTCGGCCTGAACTGCCGCGACAGCAGCATGCTCAGCACCGAAGCCACCGAAG TGCTGCAGGATCTGGCGGCCATTTCCCAGGTGCAGGATGCGCTGGAAGAATCAGAAGATGGCGAATCCGACTACATGGAAGTCATGGAATACCTGCGCGT CGCGCCGCTGCTGCTGTTCTCGGAAACCAAAAAAGCCGATGTGCCACCAGCCGCCAAGCCGTCGCTGCATTAATCGCGTGCCAGGGAAAGCCATCTGCCC
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| DNA Sequence for Gene |
>NX10_RS04495
ATGACCCATATCCCGAAAGCGGAATACAGCCGTCGCCGCAAGGCCCTGATGGCGCAGATGGAACCCAACAGCATCGCGATCCTGCCCGCCGCCGCGGTGG CCATCCGCAACCGCGACGTCGAGCACGTCTACCGGCAGGACAGCGATTTCCAGTACCTCAGTGGTTTCCCCGAGCCACAGGCCGTCATCGTCCTGATGCC CGGTCGCGAGCACGGCGAGTACATCCTCTTCTGCCGTGAGCGCAACGCCGAACGCGAATTGTGGGATGGCCTGCGTGCCGGTCAGGAAGGCGCGATCCGC GAGTACGGTGCCGACGACGCCTTTCCGATTACTGACATCGACGACATTCTTCCCGGCCTGATCGAAGGCCGCGACCGGGTGTATTCGGCGATGGGCAGCA ACCCTGAATTCGATCGGCATCTGATGGACTGGATCAACGTGATCCGCTCCAAGGCGCACCTCGGCGCGCAGCCGCCGAATGAATTCGTTGCCCTGGATCA TCTGCTGCACGACATGCGCCTGTATAAATCGGCGGCAGAAGTGAAGGTCATGCGCGAAGCCGCGCGGATTTCGGCGCAAGCGCATATCCGCGCGATGCAG GCCAGTCGTCCGGGGCTGTATGAATACAGCCTGGAAGCCGAACTGGATTACGAATTCCGCAAGGGCGGGGCAAAGATGCCGGCCTACGGTTCGATCGTCG CCGCCGGGCGCAACAGCTGCATCCTGCATTACCAGCAGAATGACGCCTTGCTCAAGGACGGCGATCTGGTGCTGATCGACGCCGGTTGCGAGATCGACTG CTACGCCAGTGACATCACCCGCACGTGGCCGGTCAACGGCAAGTTCTCGCCGGAGCAGAAGGCGATCTACGAGTTGGTGCTGGCGTCACAGGAAGCCGCG TTCGCCGAGATCGCACCGAACAAGCACTGGAACCAGGCGCACGAAGCCACGGTGCGGGTGATCACCGCAGGTCTGGTCAAGCTTGGTTTGTTGCAGGGCG AGGTTGACGAATTGATCGCCAGCGAAGCCTACAAGGCTTTTTATATGCACCGCGCCGGCCACTGGCTGGGCATGGATGTGCATGATGTTGGTGAGTACAA GGTCGGCGGCGAATGGCGCGTGCTGGAGGTCGGCATGGCGCTGACCGTGGAGCCGGGCATCTACATCGCAGCGGACAATCAGAACGTGGCGAAGAAATGG CGCGGCATTGGCGTGCGCATCGAGGACGACGTGGTCGTAACGCGATCCGGTTGTGAAATTCTCACCAGCGGCGTGCCAAAAACCGTCGCCGAGATCGAAG CGCTGATGGCACAAGCAAGGACACATGCAGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCGAGTCAATCTGGCAATCATCGGTGGCGGTCTGGTCGGCGCCAGTCTGGCGTTGGCGTTGCAGGCCGGGGCCAAGGCGCAGGGCTGGAAAATCGTCCT GATCGAACCGTTCGCCCCCGGCGACAGCTGGCAGCCGAGCTACGACGCCCGCTCCTCGGCGCTGTCGTTCGGCTCGCGGCAGATTTATCAGCGCCTGGGC GTGTGGCAGGAAATCTCCCGCCGCGCCGAGCCGATCAAACAGATTCACGTATCCGACCGCGGCCGCTTCTCCACCGCGCGCTTGTCGGCGATGGAAGAGG GTGTGCCAGCGCTCGGTTACGTGGTGGAAAACGCCTGGCTCGGCCAGTGCCTGTGGCAACACCTCGACAAAGACGTGATCACTTGGCGCTGCCCGGCGGA GGTCACGCGCATGGAGCCGTTGGCCGATGGCTATCGCCTGACCCTCAACGATGAAACCACGCTGGAATGCGACCTCGCGGTGCTCGCCGATGGCGGCCGC
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| Amino Acid Sequence |
>Xaa-Pro aminopeptidase
MTHIPKAEYSRRRKALMAQMEPNSIAILPAAAVAIRNRDVEHVYRQDSDFQYLSGFPEPQAVIVLMPGREHGEYILFCRERNAERELWDGLRAGQEGAIR EYGADDAFPITDIDDILPGLIEGRDRVYSAMGSNPEFDRHLMDWINVIRSKAHLGAQPPNEFVALDHLLHDMRLYKSAAEVKVMREAARISAQAHIRAMQ ASRPGLYEYSLEAELDYEFRKGGAKMPAYGSIVAAGRNSCILHYQQNDALLKDGDLVLIDAGCEIDCYASDITRTWPVNGKFSPEQKAIYELVLASQEAA FAEIAPNKHWNQAHEATVRVITAGLVKLGLLQGEVDELIASEAYKAFYMHRAGHWLGMDVHDVGEYKVGGEWRVLEVGMALTVEPGIYIAADNQNVAKKW RGIGVRIEDDVVVTRSGCEILTSGVPKTVAEIEALMAQARTHAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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