Pseudomonas fluorescens SF39a, NX10_RS03960

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain SF39a contig_2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGATCCGCATCACCCGCATGCGTGCATAAACCTGCCTATTACAAGGAGTCCTACATGACCAAAACCGTCATCACCAGCGACAAGGCCCCGGCCGCCATCG GCACTTACTCCCAGGCGATCAAGGCAGGCAATACTGTTTACATGTCGGGCCAGATCCCGCTGGACCCGAAAACCATGGAACTGGTTGAGGGCTTCGAAGC CCAGACCGTCCAGGTCTTCGAGAACCTCAAAGCCGTAGCCGAAGCTGCCGGCGGTTCGTTCAAGGACATCGTCAAACTGAACATCTTCCTCACCGATCTG AGCCACTTCGCCAAGGTCAACGAGATCATGGGCAAGTATTTCGACCAGCCTTACCCTGCCCGCGCCGCCATTGGCGTGGCCGCCCTGCCGAAGGGTGCGC AGGTTGAAATGGATGCCATTCTGGTCATCGAGTGATGCGCACGGCGCGGCTTTCACGCCGCGCCGACTGCCGCAAGAAAAGGTTTTGAAAGGATTCCACC
DNA Sequence for Gene
>NX10_RS03960
ATGCGCAAAGCGCTAGCTCTCTCGCTGCTCGCCCTGTTTCTCGGCGGCTGCGCCAGCGACCCTGCCGACCGTGACATCAGCGGCACCTGGATCAACCAGG TGGCGATCGATGCCGCCGCCAAGGGCGGTCCCCTGCGTGAAGCGCTGCAGGCTTACGGCCCGAATCTGGAATGGGACGTCAACACCAAGGCCGGTCAGGC CCGCTACACCAACGGTTTTGAGAACGTCGAAGGACGACTGCTGGGCGAAGAGTCCGGCGCCTGGAAAGTCGACTTCTACGGCAGCTCCGCCAGCGAACTG AAACGCGATGGCGGACGCCTGCGGCAAGCTGCCAGCGACAACGAACCCGAACAACTCTTCGATCGCGCACAGATCCCCGTGCCCGAAGGCGCGCCAATCG GTGCGAGCTTCGAACGCGCGCTGTATTCAGCGTATCTGGGCGGCAACTGGACCATCGCCAGCGGCCAGGGTGAAGGCGGCACTGTACAGTTTCAGGCCGA CGGCCAAGTAACCGGCCTGCCGGGCGTTGATCGTTATGCCTTGTGTCTGGCTGGTGATTGCGCATCGATGAGCAATGGCAACGACAGCATGTGGCTGCAA CTCAACGGTCAAGGCAACAACTGGATCTTTGTGCGCAAGGGCAAAGAGCTGGAGATTCTGCAGGCAGTGAATGCTGCGCTGGCGGATGAGCAACCGCAGT TTGCCGCGGGTGAGCGCAAGTGGTTGCTGGAGAAGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGCCTCCGAAATCTCAGAAGATCAAATGTGGGAGCGAGCCTGCTCGCGAACGCGGTGGGTCAGTCAACTGATAATGACTGACATACCGCATTCGCGAG CAGGCTCGCTCCCACAGTGGTTTTTGTGTTGCTGAAAATTCAGCACTTACCTTCAAGAATCGCTGCATAGCCTTCGCGATAACTCGAATACTTCGGCACC CACCCCAACGCTTTCGCCCGCGCATTGCTGCAACGCTTGCTGCCTGTGCGGCGCACGCTGGCGTCTTCCGCCCATTCAGTCACGCCCAGGTACTCGCGCA ACCAGCCCACCACTTCGGCCAACGGCGCTGGCGCGTCATCCACACCGATATAGAGCTGGTCCAACTTGACGCCCTCACGGTCTTTGTCCAGCAAGAACGC CAGCAGCCCCGCCGCATCATCGGCATGAATCCGATTGCCATACAGCGGCGGCTCGACCGCCACGCGATAGCCGCGACGCACCTGGGTCAGCAGCCACTCG
Amino Acid Sequence
>lipoprotein
MRKALALSLLALFLGGCASDPADRDISGTWINQVAIDAAAKGGPLREALQAYGPNLEWDVNTKAGQARYTNGFENVEGRLLGEESGAWKVDFYGSSASEL KRDGGRLRQAASDNEPEQLFDRAQIPVPEGAPIGASFERALYSAYLGGNWTIASGQGEGGTVQFQADGQVTGLPGVDRYALCLAGDCASMSNGNDSMWLQ LNGQGNNWIFVRKGKELEILQAVNAALADEQPQFAAGERKWLLEKQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site