Strain | Pseudomonas fluorescens strain SF39a contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATGCGCAGCGTCGACGGCCACAGCCTGCCGGTGTCGAAGGTCTACCTCGATCAGATGGCGGCGGCGCAGACCATTCGCCAGAGCTTTTTCTCGATCAACC CGGCCGAGCCGACCGTGCAGTTCAAGCTCGAGCCGTACACCCTCGATCCGGCGGTCAGCCGTTCCGAATTCAAGTTCGGCGACAAGACCATGGAATACCG TCACGGCCCGATCCTGCCAATGACCTTCAAGTGGCCGACCGATGCTGAAGACGGTCGCACCAGCCTGGTCATGGACAAGATGGCCGGGCGTCCGATCGGT ATCGAGAAGAACTCCGGCCCATGGTCGCTGTTCCGTCTGTTCGACCTGATGCAGACCGAGTACCTGAACGGGCGCGACGTACTGGTGCTGAAAGCGGACG TGGGCGGCCTGCGCGCCAACTACCTGCTGACCAGCCAGCGCACGCCGAACCCGTTCGACATGGGCGTGCTGCGCACCTTCCGTATGCCGGTGCAGCTCTG
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DNA Sequence for Gene |
>NX10_RS03825
ATGCTGGTGGCCAGTCCCTGGCGCAGCGCGGCGCGTACCGACCCGGGCAAGGTGCGGGCGCGCAACGAAGATGCCTTCCTCGATTCCCCGCAGCATGGGC TGTGGGTGGTCGCGGACGGCATGGGCGGTCATCAGGGTGGCGACATCGCCAGCCAGTTGATCGTCGCCAGCCTGGCTGAATTGCCGCAACACGAAGACTT CGACGAACGCCTCAAAGCCATCCGCCAGTGCCTGCACTGGCTGAACCGGCGACTGGGGCAAGAGTTGACCGTCACTGCCGGGCGTCACGACAGCATCATG GGCAGCACCGTCGTCGCGCTGCTGGTGGAAGGCAACCGCGCGGCCTGCATCTGGGCCGGTGATAGCCGTTGCTATATGTGGCGTGGGCAGCGTTTGTATC AGCTGTCCAAGGACCATTCGCTGCAACAGCAGTTGATCGACGGGCAGCAAATGAGCGTCGAACAGGCGGCAGCGCACCCGGCGGCTCAGGCCTTGACCCG AGCCGTCGGTGCCGCTGAAACGCTGACCCTGGATGTGCTCGAACTCGAGGTCTATCCGGGCGATGTGTTTTTGCTCTGCAGCGATGGTCTGTATCAGGGC CTGAGCAGCGACGCCCTCGGCAATGCCCTCAGCCTCAGCGCGCCGCACGTGGCGCTGGAACGTTTGTTCGACGGCGCCCTGCGAGGCGCTGCGCGGGACA ACCTGACTGCCGTGGTGATCCGCCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGAACTCGAATCGCCCATCGATGACTTGCTGATCAGCGAAGAGCAGGCCAACAACCTGACCTACTTCGCTTTCGCCAAGGGCAACAAGGCCGACCCGTT GCTGGCGCCGACGAAGGCCAGCATCGGTGCGCTGCCGGATGTACTCGCCGGTCGCTACCACCTCGAGCGTCTGCTCGGGGCCGGTGGCATGGGCGCCGTT TACCGGGCGCGGGATCTGCTGCACGAACAGTTCGGCGATCCCGACCCTTACATTGCGCTGAAAATCCTCAGCGAAGAATTTGCCGAATCGCCGGACGCCA GTGCCTTGCTCTACAGCGAGTTCGCCCTGACCCGGCGCCTGCGCCACGACAACGTCGTGCGTGCGCACACCTTTGAAGTCGACACCGACTGCCAGCGGGC CTTCATCACCATGGAATACATGCGTGGCCTGACCCTGGACAAATTGCTCTGCGAGCGGCCCCTCGGCCTGCCGTGGAAAGAACTGCGCGATATCGTCCTG
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Amino Acid Sequence |
>protein phosphatase
MLVASPWRSAARTDPGKVRARNEDAFLDSPQHGLWVVADGMGGHQGGDIASQLIVASLAELPQHEDFDERLKAIRQCLHWLNRRLGQELTVTAGRHDSIM GSTVVALLVEGNRAACIWAGDSRCYMWRGQRLYQLSKDHSLQQQLIDGQQMSVEQAAAHPAAQALTRAVGAAETLTLDVLELEVYPGDVFLLCSDGLYQG LSSDALGNALSLSAPHVALERLFDGALRGAARDNLTAVVIRQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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