Pseudomonas fluorescens SF39a, NX10_RS03055

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain SF39a contig_2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCGCCCAACCGTAATCCGCCGGGTAGATATCGCTGGTCAGGCGTTCTTCATAACCGTGCAGCTGGTCGGGCCCACAGAAATGCATCTTGCCCGACAGCG CGGTGCGGTAGCCGAGACGGCGCAGGTAGTGCGCATAAGTGGGGATATCGGCGGGGAAATCGGCAGCGTTGTCGTAAGCGCCGATCTTGCTCGGCAACTG GCCGCTGACCAGGGTGAAACGCGACGGTGCACACAACGGGCTGTTGCAATAAGCAGCATCGAACACCACGCCTTGGGCGGCGAGGCGGGACAGATTCGGC AGTTTGATCGGCGATGGGCCGTAGAACGGCAACATTGGCGCGGCCATTTGATCGGCCATGATGAAAAGAATGTTCTTGCGCTTCATGTGATCGCGGCATT CCATGTTGAATATTTATGCGAGAGTGCTGCGATCGAGCATGGAGTCCATGCCTATTTCGGTAAAGCCCGCGCCGGACAATGACTAGGATAAGCACAGCTT
DNA Sequence for Gene
>NX10_RS03055
ATGTATGAAGCCCTCGGTGACCTGTCCCTCGATCTGCTCCGCGCCTTTGAGGCAGCGGCACGCCATCGCAGCTTTACCGCTGCTGCGGTAGAGCTCGGCA CTACGCAACCGGCGATCAGCCAGCAGATAAAACGTCTGGAAGAACAGCTCGGTACGCGTCTGTTCGATCGTATTTATCGGGGCATTGAACTGACCGAAGT GGGCGCCCTGCTGTTCGAGCAAGTTACCCTCGGGTTGCAGAATATCGACGCAGGATTGAGCGCAATCAGCACTCAGCAGCAACATGAAGTGCTGCAAGTA GCCACGGATTTTGCGTTCGCCGCTTATTGGTTGATGCCGCGCCTGCACCGCTTTCACGAAGCCAATCCGCACATCGATGTCAGCCTGGTCACCAGCGAGC GCAACCACAACATGCTGCGCACCGACATCGACGTGGCGATCCTGTTTGGCGACGGTCGCTTCAAGCAGGGTGAGAGCCACTGGCTGTTCAGCGAAGAAGT GTTTCCGGTGTGCAGTCCGCTGTTGCTCAAGGACCGCTCATTGCCGTTGCCCGCGCAGGCGCTGCTGGAGTTTCCGCTGCTGCATCTGCGTGGGGAAAAC AGCAGTAATTGGTTCGACTGGAGTGGCTTGTTTCGTCAATTGGGCCTGACTACGCCACCGGCGCCGGGCCAGTTGCGCTTCGACAATTACACCTTGCTGA TTCAGGCTGCGATTGGCGGGCAAGGTGTGGCCATTGGCTGGCGGCACCTTGTGGATAACTTGCTGGTGCAGGGGTTGCTGTGCCGGCCACTGGCGGAAAC CACGCTGTCGCGGCTGGGGTATTACGTGGTGTTGCCGCAACGCAAGCGTCGGGGTGCGTTGATTCGGGAATTTGTTGATTGGTTAATGGCGGAACAGGCC AGCAGTGCGGAATCGCTGAACGGTCTGGCCCTGCCCTCGATTGCGGTGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGAGGAAAAGAGCATCCGATCGCGGCTCGAGCCTTCGGCAGCTCCACGGGTGCGATCTTTTACGAATCAGAAGCCGCCACAAAATTCACATGCTCACCGA CATGCAGATTCAACCGCAGCTCATCGGCGATGCCCACCGCGACACGGTTCAGGCGCTCCAGCGGTTCGGCCAGTCCCGGTTCGAGATTGCCGCCGACCTG ACTGAAGTGCTCGATGGTCAACCCGGCCACGCCATGCGGCGCATTGACCAGGGTCCAGCGCAGTGAGCTGCTTTGTACTGCCTCGAGGATTTCTTCGGCA GCGTGACGTTGCAGACGTTCGTCACTGTCAGGTTCGTCGAGCACGGCAAAATTGCCGACCAGAAACAGGCGGGGCACGCTGGCCAGTTGCAAACCTTCGA CCAACGCGTCGACTGCCAGCACCTGTTCAACCGGCCCCAGAGTCACCGAGCGCTCGACGTGGTCGCTGCTGAACGGCAGCCCTGGCGCGTCCAGCAGGCA
Amino Acid Sequence
>LysR family transcriptional regulator
MYEALGDLSLDLLRAFEAAARHRSFTAAAVELGTTQPAISQQIKRLEEQLGTRLFDRIYRGIELTEVGALLFEQVTLGLQNIDAGLSAISTQQQHEVLQV ATDFAFAAYWLMPRLHRFHEANPHIDVSLVTSERNHNMLRTDIDVAILFGDGRFKQGESHWLFSEEVFPVCSPLLLKDRSLPLPAQALLEFPLLHLRGEN SSNWFDWSGLFRQLGLTTPPAPGQLRFDNYTLLIQAAIGGQGVAIGWRHLVDNLLVQGLLCRPLAETTLSRLGYYVVLPQRKRRGALIREFVDWLMAEQA SSAESLNGLALPSIAV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site