Pseudomonas fluorescens SF39a, NX10_RS18805

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain SF39a contig_16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAATCAACCGGCGCGCCAGCGGCAGCAGAGATTCGCCTTCCGGGGTCAGCGCGACATTCCGGGTGTTGCGGCTGAACAGCCGACCGCCCAGGCCCTCTTC CAGCGCTTTGATGGTCAGGCTGAGCGCCGATTGCGACAGGTGCAAGCGCTCGCAAGCCACGGCAAAGCTCAGGCTATGGGCGACGGCGAGAAAGGCACGG ATCTGTTTGATGGTCATGGTCGCTTTGCTCCAGTTGCAAGCGTCAAGCTTTAAGCTGCAAGTCGTGATTACTGATCGTTCCCATGCTCTGCGTGGGAACG CAGCCCGTGACGCTCCGCGTCACTGGACGCAGAGCGTCCCTAGAGGCATTCCCACGCAGAGCATGGGAACGATCATCTCAGCCACCGGTGAGTTTTATCA ATCAATCAACCGTAAAAATCAACTTAACAAATATATCCCACAGAGCGACACTCCAGTCATTCGGCTAGCCAGCCGCCCGCAAATAATAAAAGAGGTGCCT
DNA Sequence for Gene
>NX10_RS18805
ATGGCAGGTTTCGACAAGCGTGTGTATTCCTACGAGGAAGCGATGGCCGGGCTGGAAGACGGCATGACCGTCATCGCCGGCGGTTTCGGCCTGTGCGGCA TTCCGGAAAACCTGATCGCCGAGATCAAGCGCAAGGGCATCCGTGACCTCACCGTGGTTTCCAACAACTGCGGCGTCGACGGCTTCGGCCTCGGCGTGCT GCTAACCGACCGCCAAATCAGCAAAGTCATCGCCTCTTACGTCGGCGAAAACAAACTGTTCGAAGAGCAACTGCTCAAGGGCGACATCGAAGTCATCCTC ACCCCGCAAGGCACCCTGGCCGAGAAGATGCGCGCGGGCGGTGCCGGCATTCCGGCGTTCTTCACTGCCACAGGCGTCGGCACCCCGGTTGCCGAAGGCA AGGAAGTGCGTGAATTCAAAGGGCGAAAGTACCTGATGGAAGAGTCCATCACCGGCGACTTCGCCATCGTCAAAGGCTGGAAAGCCGACCATTTCGGTAA CGTCGTTTACCGCCACACCGCGCAGAACTTCAACCCGCTGGCCGCCACTGCCGGCAAGATAACCGTGGTCGAAGTCGAAGAAATCGTCGAACCCGGCGAA CTCGACCCGACGCAAATCCATACCCCGGGCATCTACGTCGACCGGGTCATTTGCGGCACGTTCGAAAAACGCATCGAACAGCGCACCATCCGCAAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCAGGCCTACGGAGAACAACAACATGGCACTCACCCGCGAACAAATGGCTCAGCGCGTCGCCCGCGAAATGCAGGACGGCTACTACGTCAACCTCGGCA TCGGCATTCCGACCCTGGTCGCCAACTACATCCCCGAAGGCATGGAAGTCATGCTGCAATCGGAAAACGGCCTGCTCGGCATGGGCCCGTTCCCGACCGA AGAAACCATCGATGCCGACATGATCAACGCCGGCAAACAAACCGTGACTGCGCGAATCGGCGCGTCGATCTTCAATTCCGCCGAATCCTTCGCGATGATC CGCGGCGGCCATGTCGACCTGACCGTCCTTGGTGCCTTTGAAGTGGACGTCGAAGGCAACATCGCTTCGTGGATGATCCCGGGCAAGCTGGTCAAGGGCA TGGGCGGCGCCATGGATCTGGTGGCCGGTGCCGACAACATCATTGTCATCATGACCCACGCATCGAAGGACGGTGAGTCCAAGCTGCTGGCCAAATGCAG
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MAGFDKRVYSYEEAMAGLEDGMTVIAGGFGLCGIPENLIAEIKRKGIRDLTVVSNNCGVDGFGLGVLLTDRQISKVIASYVGENKLFEEQLLKGDIEVIL TPQGTLAEKMRAGGAGIPAFFTATGVGTPVAEGKEVREFKGRKYLMEESITGDFAIVKGWKADHFGNVVYRHTAQNFNPLAATAGKITVVEVEEIVEPGE LDPTQIHTPGIYVDRVICGTFEKRIEQRTIRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site