Pseudomonas fluorescens SF39a, NX10_RS16615

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain SF39a contig_13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGATGTTCAAATCTGGCATCGGACGTGCTTCACCTTCGAACTCGGTATCGACGCCGGCCATGATTTTCAGCAGCGTGGATTTACCCGAACCGTTGAGGCC GAGCACGCCGATCTTGGCGCCGGGGAAGAAGGACAGCGAAATGTTTTTGAGAATTTCCCGCTTCGGCGGAACAACTTTGCCCAGCCGATGCATGGTGAAG ACGTATTGAGCCATGGAAAACCTTGGGTCAGTGACAGATGAATGATTGGAGCGCAGGCGACGCCTGGCCAGACTGTGCGCGTCGTTCACTTGATCACGAT CAATGCGTGCGCGCTGGAAAAAGTCTGATTGTAGGGGCTGGAACGCCCCCGTCTAACCGGCAAAGCTACCTGAATGACCGATGGCAGTCCAGCCGAGAGG GGCTGGCACTTAGCCACGAGTCAAGGCATGCTAGCCGCCCTTCGGGCGTCCGGCTTATAGTGCACGTCGCGCCAGTCCAGCCAAATCGCAGGATCACAGC
DNA Sequence for Gene
>NX10_RS16615
TTGACCAATGTCACTCCGCCAGCCTCTGTGAGCAGCACCCCACCGGCGCCCGGCTCGCCCCTGCGCGGAACATTAAAGGGTGCGCTGGCCACCCTCGTGC TGTTATTGCTCGCGTTGCTGTTCTGGCAACTGCTCGATCAATTGCGCGAAACCCAGAAGAATCAGCGTCAGTACACCATCGATTACACCGCCGACCTTGC CGCCCAGGTCAGCCTGAACATGGCGCTGAACGCGCAAATCGCCCTCAACCTGCTACCGATCGTCGAACAACCGCAAACCGCCGACGAACAGCAGATGCTC CTGCGCAAGTTGCAACGCTCGCTGCCCGACCTGCGCAGCATGGCCCTGCTCTCGCCCTCCGGCCGGATCATCAGCGACAGCGCCACTGACAGCTCCGACG CCGATTACCTGTCCGAACTGGTGCGCCGCAGCCGCGCCCAGGCGCACTACTTCAGCAATGCCGATGACGGCTCGGTGGTGCATCTGCTGCTGCATCAGGC CAGCGGCAGCAGTCGTGGTTACTGGGCGTTGCGCTTGACGCCGACCTTCTTCGATTCGCTGACCAAACAGGACGCCACCGCCCTGCGCCCGCTGTGGCTG GTGGAAAACCGCCTCAACCACCAGATCATCAGCCGCGAGGCCGGGCTGCCGTCAAACAAGGCTGGCGGGTTGACGCCCGACGATGTCGCCAACACCGTGC TGACCGTGCCGCTGAGCAGTAGCGACTGGCAACTGCGCGGGCTGTTCGACCGCCAGCGCGTACTGGAAGAATTGCTGCCGGCGTTCATCGGCAAATGCCT GCTCGGCCTGGCGTTCTCGATGTTGCCAGTGATCGCGCTGCTGAACATGCGTCGGCGCCAGCGCCAAGTGCATGAAGGTCGGCGGCGCTATCAGGATATT TTCGAAGGCACCGGTGTGGCCTTGTGCGTACTCGACCTTTCCGGCCTCAAGCAGATGTTCGACAAGGCGCAGATCCAGACCAGCGACCAGCTCAAGGCCT GGCTCGACCAGCCGCAGCAGCGCCAGCAGTTGCTTGCGGAAATGCGCGTCACCGAGGTCAATCAGGTCGCCCTGCAACTGCTCGACGTGCATTCCTGCGA CGATGCCTGGCAACTGCTGATCGATGGCCAGCGTCATCCGCAATGCGCGATCGGTCAGCAGATCCTCGACGCCGTCCTGCAGCAGCAGAAGCAGCTGGAA CTGGAAATCAAACTGCCCAACAGCAACGGTCGCGACCAGCACCTGTGGATGGTCCTGCGCCTGCCGAGCGAGCAGCACGACTATAAAGCGGTGATCCTCA GCATCAACGACATCACCAGCCGCAAGCTGATCGAGCTGTCGCTGCTGGAGCGCGAAGGCTTCTGGTCGGACGTGGTGCGCACCGTGCCCGATCATCTGTA TGTGCAGGACGTGATCAGCCAGCGGATGATTTTCAGCAACCACCACCTCGGCCAGACCCTGGGCTACAACCGCACCGAACTGCATCAGATGGGCGAGTAC TTCTGGGAAATCCTCCTGCACCCGGAAGACGCCGACTATTACCATCGTTCGCGGCAGTTGCAGCGCCACGCCGGTTACAGCCAGTTGTTGCAATGCCAGT TGCGCTTCCGCCATCGCGACGGCAAGTGGCGGCGCTTCGACATCCGTGAGCAGGCGCTGGCGAGGGACAAGCACGATCAGGTCACGCGGATCATCGGCGT GGCCAAGGACATCACCGAACAGATCGAGGCCAGCGAATCGCTGCGTGACAGCGAGCAGCGCTACCGCATGCTCGCCGAAAGCATCAGCGACGTGATTTTC TCCACTGACAGCAAGCTCTCGCTGAACTATGTCAGCCCCTCGGTGCAAGCCGTGCTCGGTTACAACGCCGAGTGGATTTTCCAGAACGGCTGGCAATCGA CCATCGCCAACCCCGGGCAATTGAACGGCATCTACGCGCTGATGGACCGCGTCAGCAAAGCACTGGACAAGCCCGAGCAACTGGCATTGTTGCGCAATCA GGTGCAAACGCAGTTGTTCCTCTTCGATTGCCTGCGCGCCGACGGCCGCAAGATTCCGATCGAGCTGCGCCTGGTGCTGGTGTGGGACGAACACGGCGCG TTCGAAGGCGTGCTCGGCGTCGGCCGCGATATCAGTCAACAGCGCCGTGCCGAAAAAGATTTGCGCATGGCCGCCACGGTATTCGAGCACTCGACTTCGG CAATCCTGATCACCGACCCGGCCGGCTACATCGTCCAGGCCAACGAAGCCTTCAGTCGGGTCAGCGGCTACAGCGTCGGCGAAGTCCTCGACCAGTTGCC AAACATGCTCACCGTCGACGAGCAGCAGGATGCCCACCTGCGCTATGTGCTCAAGCAGTTGCACGAGCACAGCACCTGGGAAGGCGAGGTGTGGATGAAG CGCCGCAACGGCGAGCATTACCCGGCGTGGGTCGGCATCACTGCCGTACTCGACGACGAGGGCGATCTGGCCAGTTACGTGTGCTTCTTCAGCGACATCA GCGAGCGCAAGGCCAGCGAGCAGCGCATCCACCGCCTCGCCTATTACGACGCTCTCACCCACCTGCCGAACCGCACGCTGTTCCAGGATCGGCTGCATAC CGCGCTGCAAGCGGCCGAACGGCAGAAGTCGTGGGTGGTGCTGATGTTCCTCGACCTCGACCGTTTCAAACCGATCAACGACTCCTTGGGCCACGCCGCC GGCGACCGCATGCTCAAGGATATGGCCACGCGCCTGCTGGCCTGCGTCGATGACGACGACACCGTGGCGCGCATGGGCGGCGACGAATTCACCTTGCTGC TGCAGCATCGCTCCAACCGCGAACTGGCGCTGAACCGGGCGATTCATGTCGCCGAGCAGATTCTCGCCAGCCTGGTGCGGCCGTTCGTGCTCGAGGGTCG TGAGTTCTTCGTCACCGCCAGTATCGGCATCGCGTTGAGCCCGCAGGACGGCAACGAACTCAGCCAGTTGATGAAGAACGCCGACACGGCGATGTACCAC GCCAAGGAACGCGGCAAGAACAACTTCCAGTTCTATCAGGCCGACATGAACGCCAGTGCGCTGGAGCGTCTGGAGCTGGAAAGCGATTTGCGCCATGCGC TGGAGCAGAACGAATTCGTCCTGTATTACCAACCGCAGTTCAGCGGCGACGGCAAACGTCTGACCGGCGCCGAAGCACTGCTGCGCTGGCGCCATCCCCG TCGCGGACTGGTACCGCCGGGGGATTTCATTCCGGTGCTGGAAGAGCTCGGCCTGGTGGTGGATGTTGGCGACTGGGTCATCAGCGAGGCCTGTCGACAG CTGAAAACCTGGCACCAGCAACGGGTGCGGGTGCCGAAGGTGTCGGTGAACATCTCCGCACGGCAGTTTTCCGATGGCCAGTTGGGCACCCGAATCGCGA CGATCCTGCGCGAAACCGGCCTGCCCCCGGCGTGTCTGGAGCTGGAATTGACCGAAAGTATCCTGATGCGCGAAGTCAGCGAGGCAATGCAGATTCTCGC CGGATTGAAAAACCTCGGCCTGAGTATCGCGGTCGACGACTTCGGCACCGGTTATTCATCGCTGAACTACCTCAAACAATTCCCGATCGACGTGCTGAAG ATCGACCGCACCTTCGTCGATGGCCTGCCGTCCGGCGAACAGGACGCGCAGATCGCCCGCGCGATCATCGCCATGGCCCACAGCCTGAATCTGGCGGTGA TCGCCGAGGGCGTGGAAACCCACGAGCAACTGGACTTCCTGCGTGAGCACGGTTGCGATGAAGTGCAGGGATATCTGTTCGGCCGGCCGATGCCGGCGGG ACGGTTCGAGGCGCAGTTCAGCAATGATGCGCTCTTCATGTTCGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGAGCCGCTTCGGGCGGCTCAGGTCAGTCGAACATGAAGAGGAGCTGCAAGAGGTTAGCTGCAAGCTGCAAGCTGCAAGTGGAAGCCGAAGCGCTTTT GACTTGCAGCTTGCAGCTTCCAGCTTGAAGCCCGCTTATCCACAACCTGACTGTGTTTCATAGCCCTTCTAAAAGCGGTTGGGTTAGAATGCCCCCCTTT TCTGCCCCCGATCCTTGAGGACCGCCATGTTCAGCCGTGATTTGACTATTGCCAAGTACGACGCCGACCTTTTTGCCGCCATGGAGCAAGAAGCTCAGCG TCAGGAAGAACACATTGAGCTGATCGCTTCGGAAAACTACACCAGCCCAGCGGTGATGGAAGCTCAAGGCTCGGTCCTGACCAACAAGTACGCCGAAGGC TATCCGGGCAAGCGCTACTACGGTGGTTGCGAGTACGTTGACGTGGTTGAACAACTGGCCATCGACCGCGCCAAGGAACTGTTCGGCGCCGATTACGCCA
Amino Acid Sequence
>diguanylate phosphodiesterase
MTNVTPPASVSSTPPAPGSPLRGTLKGALATLVLLLLALLFWQLLDQLRETQKNQRQYTIDYTADLAAQVSLNMALNAQIALNLLPIVEQPQTADEQQML LRKLQRSLPDLRSMALLSPSGRIISDSATDSSDADYLSELVRRSRAQAHYFSNADDGSVVHLLLHQASGSSRGYWALRLTPTFFDSLTKQDATALRPLWL VENRLNHQIISREAGLPSNKAGGLTPDDVANTVLTVPLSSSDWQLRGLFDRQRVLEELLPAFIGKCLLGLAFSMLPVIALLNMRRRQRQVHEGRRRYQDI FEGTGVALCVLDLSGLKQMFDKAQIQTSDQLKAWLDQPQQRQQLLAEMRVTEVNQVALQLLDVHSCDDAWQLLIDGQRHPQCAIGQQILDAVLQQQKQLE LEIKLPNSNGRDQHLWMVLRLPSEQHDYKAVILSINDITSRKLIELSLLEREGFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGQTLGYNRTELHQMGEY FWEILLHPEDADYYHRSRQLQRHAGYSQLLQCQLRFRHRDGKWRRFDIREQALARDKHDQVTRIIGVAKDITEQIEASESLRDSEQRYRMLAESISDVIF STDSKLSLNYVSPSVQAVLGYNAEWIFQNGWQSTIANPGQLNGIYALMDRVSKALDKPEQLALLRNQVQTQLFLFDCLRADGRKIPIELRLVLVWDEHGA FEGVLGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYSVGEVLDQLPNMLTVDEQQDAHLRYVLKQLHEHSTWEGEVWMK RRNGEHYPAWVGITAVLDDEGDLASYVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQAAERQKSWVVLMFLDLDRFKPINDSLGHAA GDRMLKDMATRLLACVDDDDTVARMGGDEFTLLLQHRSNRELALNRAIHVAEQILASLVRPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYH AKERGKNNFQFYQADMNASALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVISEACRQ LKTWHQQRVRVPKVSVNISARQFSDGQLGTRIATILRETGLPPACLELELTESILMREVSEAMQILAGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLK IDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRPMPAGRFEAQFSNDALFMFD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site