Pseudomonas fluorescens SF39a, NX10_RS16230

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain SF39a contig_13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATGTCTTGCTCAACGGTTAAACGTCGACCCATACGCCTTGTGTGTCTTCCCGGCATTCAATCGCCGTCAGCGACTGCCCGGCGCAGGGGCCGGCAACGC ATTCGCCGTTCTCGATCAGAAACAGTGCGCCATGGGTGGCGCACTGGATCAGGCTGTTGCTCGGGTCGAGAAACTGGTCAGGCTGCCATTCCAGCCCGAC ACCCCGGTGCGGGCAGCGATTGAAATAGACAAAGACTTGGCCACCCCGACGTACGGCAAACAGCTTTTTGCCTTCGATTTCGAAACCGCGACTGCCGGCT TCGGCCAGATCGCCGCCGGCGCAGAGAAACTTCATGGCTATCCTCTAATGTCCGCTCGTGTCGGGATATGTCCGAGCTTGACGTTCAAATGCAAACAATT ATCAAATGGCGACCTTCTCCCACAGGGAGTCTGGCCGTTTGCCGAGGATACTTGGCTCGCTGCGCCGATGCCCGGGAAACCTTGTTCAAGGAAGCTGTGT
DNA Sequence for Gene
>NX10_RS16230
ATGCGCCTGAAAACCCGCGTTGTCGTGCTGTGCGCCGGCCTTTTGCTCTGCCATCAGGCGGCCGCAGCGGATTTACCGCAACGCTGGGTCAGCGCCGGCG GCGCGCTGTCGGAATGGGTCAGCGCACTGGGCGGCGAGTCGAAGCTGGTGGGGGTCGATACCACCAGCCAGCATCCCGAATCGTTGCAGGCGCTGCCGAG TATTGGCTATCAGCGCAGCCTGTCGGCGGAAGGCATCTTGAGCCTGTGTCCGGACATTCTGATCGGCACCGAAGAAATGGGCCCGCCGCCGGTTCTGGCG CAAGTCAAAGCGGCCAAGGTCAAGGTCGAGTTGTTTTCAGCCCAGCCTGATCTGCCGACACTGGAAAAAAATGTCACTCAACTGGGCCAGTTGCTCGGCG CGCAAAGCCAGGCGGCGCAGTTGCTGCAGACTTATCAACAGCAACTCCAGGCGCAGAAAGCGCGCGTTGCCCAAGTGCAGACCACGCGCAAAGCCCCCGG AGTGTTGCTGTTGCTCGGGCATGCGGGCGGCAAGCCGTTGATCGCCGGCAAGGACACTGCCGCCGATTGGCTGCTGCAACAGGCCGGCGGCCATAACCTC GCAACGCATACCGGCTACAAACCGTTTTCCATGGAATCTCTCGCCAGCCTCGATCCCGAGGTGCTGGTGTTCGCTGACCGTGCGCTAACCGGCGAAGCAG CAAAAGCGGCATTGTTCAAGGAAAACCCCATCCTCAATTCCAGCCGCGCGGCCAAGAGCGGTCGGGTGATGGAGCTGGATCCAACGCTGCTGGTTGGCGG TCTCGGGCCGCGTCTGCCGGCTGCTTTGCAAACCCTGACTGATGGCTTCTACCCGGCCAAGGGCGGCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCACACTGGTCAAACCCCGTGGCTTGTTTATCGGCCTGACATTGCTGTGTCTGCTGGCGATCTGGCTGTCGCTGGCGCTGGGGCCGGTGAGTCTGCCGCT GTTCGATACCTTGCGCGCGGCGCTGCGTCTGATCGGCGTGCCGTTGGCGCCGCAAGGATTGGAGCAGGCTGAGCTGATTCTCGGCCAGATCCGCCTGCCG CGAACCTTGCTCGGCTTGGCGGTCGGCGGCGTACTGGCGCTGTCCGGGGTGGCGATGCAAGGACTGTTTCGTAATCCGCTGGCAGATCCGGGGCTGGTCG GCGTGTCCAGTGGCGCGGCACTTGGCGCGGCGATTGCGATTGTCGGCGGTTCGTTCTTTGGCGGCCTGCCGGAGTGGTTTGGGCCGTATCTGTTGTCGGT GTGTGCGTTTCTTGGCGGGCTCGGGGTGACGGCGCTGGTCTATCGGCTGGGCCGGCGCAACGGTCAGACCCATGTGGCGACCATGTTGTTGGCCGGTATC
Amino Acid Sequence
>ABC transporter substrate-binding protein
MRLKTRVVVLCAGLLLCHQAAAADLPQRWVSAGGALSEWVSALGGESKLVGVDTTSQHPESLQALPSIGYQRSLSAEGILSLCPDILIGTEEMGPPPVLA QVKAAKVKVELFSAQPDLPTLEKNVTQLGQLLGAQSQAAQLLQTYQQQLQAQKARVAQVQTTRKAPGVLLLLGHAGGKPLIAGKDTAADWLLQQAGGHNL ATHTGYKPFSMESLASLDPEVLVFADRALTGEAAKAALFKENPILNSSRAAKSGRVMELDPTLLVGGLGPRLPAALQTLTDGFYPAKGGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site