Pseudomonas fluorescens SF39a, NX10_RS02440
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain SF39a contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCAACAGGTAATTGCCAATCTGACCTCGCAACTGGAGAGCGACGGTGCTGCCCTTGAGTTGCTTCAGCGAAATATTCTGCAAGAGGGCAAGTCGATTCG CTTCATGCTTGGCAGCGTATCTGCGGAATCAACGATTACGATGGTCGTCATTTCGTTTGCCGTCAAAGAGCCTGTTCAGGGCAATGTGCTTGAGCGACGC TTCAATGCTGAGCAGATAGTGGGCAACCTTGCTGTTGATTGCTACAAGGCTCTTATAGATGCCGATGATTACTGTTTCTCGAGAGCCAGGATTATTGCGT TATTGGGTGAGCGGCGCGAAAAGCAGATTATCGCCCTGACCTGAGAGCGCGGCTGAGGCAACAACTGAAGCCTGCCTGCCCCACCTGTCGAGACAGAGGG CAGACTTTTCATACCGGTGGGCAAAGCAGGCATAATACTGCGCCTTCGCCCGCGAAGCGCTTCTGCCACGCAACCGGTCAGCCCCTTGAACGAACGCCCG
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| DNA Sequence for Gene |
>NX10_RS02440
ATGTCCACCGCCATACGCCCCTCGGCCTGTCCGGGGTTACTGCGTATCGTCCAGGCACTGGACGGCGGTATCTGTCGGATCAAGCTCGATGGCGGTTCGA TCAGCGCTGATCAGGCCGATGCAGTGGCCGCTGCCGCCGGAGCGTTTGCGAGCGGTGCGATCGAAGCGACCAATCGCGGCAACCTGCAGATTCGCGGCAT CGGTGCGCAAGCGGCGGCGCTGATCGAGCGCTTGCTGGCCGCTGGCCTTGGGCCGAAGAACGCCGCCGGGGACGATGTGCGCAATCTGATGCTCAGCCCG ACCGCCGGCATCGATCGGCAGATGCTGATCGACACGCGCCTGCTCGCAGGGCAAATCCTCGACACCTTGCAAAGCCATCCGCGCTTCCATGAGTTGAGCG CCAAGTTCGCCGTGCAGCTCGATGGCGGCGAAGCGCTGGCAATGCTCGAGCATCCCCATGATCTGTGGTTGTCGGCGTTCGAGCGTGACGGCGAAACCCT CTGGGCATACGGTCTGGCCGGTTGCCCGACCGATCGCCCTCTCGGCGCTGTGACTCAGGACAACGCTCACGCGCTGGTGGTCGCCGCGCTGGAACTGTTC CTCGACCTGGCCCGGCCAGAGCAAACACGGATGCGCCATCTGCTCGATGAGTTGCCCAGGCTCGCGTTTCTGGAATCGTTGCGCGAGCGCGTATCGCTCA AGGCAATCAGCAATTGGCAGCGCCCGCCGTCGGCAGACGCGCTGCACATCGGCGCTCACCAGCAGAACACGCAGGGTCTCTGCTACGTCGGCGCGGTGCC GCCACTGGGCCGACTTGATCCGGCGATGCTGCGTGGCGCGGCGCAACTGGCCCGACAGTTTGGCGATGGCAGTCTGCGCTTCACGCCGTGGCAGAGCCTG CTGCTGCCGAACGTGAACGCCACTGATACCGACAACGTGCTTGAGCAGTTGCGGGCGTTGGGTCTGTTGATGACCGAGGCCGAACCACTGGCGCGCCTGA TCGCCTGCACCGGCGCCGATGGCTGCGGCAAAGGCCTTGCCGACACCAAGCAGGACGCCCGGCAACTGGCACCTTTGCTGCCCGCAGGGCTCAGCGTGCA CCTGTCGGGCTGCTCGCGCTCCTGCGCCGCCGCTCACTGCGCGCCCGCCACACTGCTGGCCGTTAGCCCCGGCCATTACGACCTTTATTTTCGCGATGCA GCACAACCCGGTTTCGGCTCGCTGCACGCCTGCAACCTTACTATTGAAGCGGCCGCGACTTTGCTCGACGCCCGCTCCCGGAGCCCCCTTGATGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTACATCCGCGACGGTCAGGAGATCTACCGCAACTCCTTCGCGATCATTCGCCGCGAGGCCAATCTGGCGCGCATTCCCGCCGATCTGGAAAAACTCGCA GTGCGGGTGATCCACGCCTGCGGCATGGTCGAGGCCGTCGACGGTCTGCAATTTTCCGACGGCGCGGGCAAGGCCGGGCGCAATGCACTGGCGGCCGGTG CGCCGATTCTCTGCGACGCGCGGATGGTCTCCGAAGGCGTGACCCGCGCGCGCCTGCCGGCCAACAATCAAGTGATCTGCACCTTGCGCGACGACAGCGT GCCGGAGCTGGCTCGCGAGTTGGGTAACACCCGCTCGGCCGCCGCGCTGGAACTGTGGCGCCCGCACCTTGAAGGCAGCGTGGTGGTGATCGGCAACGCG CCGACCGCACTGTTCTACTTGCTGGAAATGCTCGACGCCGGCGCGCCAAAACCGGCACTGATCCTCGGCTTCCCGGTGGGTTTTGTCGGCGCTGCCGAAT
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| Amino Acid Sequence |
>oxidoreductase
MSTAIRPSACPGLLRIVQALDGGICRIKLDGGSISADQADAVAAAAGAFASGAIEATNRGNLQIRGIGAQAAALIERLLAAGLGPKNAAGDDVRNLMLSP TAGIDRQMLIDTRLLAGQILDTLQSHPRFHELSAKFAVQLDGGEALAMLEHPHDLWLSAFERDGETLWAYGLAGCPTDRPLGAVTQDNAHALVVAALELF LDLARPEQTRMRHLLDELPRLAFLESLRERVSLKAISNWQRPPSADALHIGAHQQNTQGLCYVGAVPPLGRLDPAMLRGAAQLARQFGDGSLRFTPWQSL LLPNVNATDTDNVLEQLRALGLLMTEAEPLARLIACTGADGCGKGLADTKQDARQLAPLLPAGLSVHLSGCSRSCAAAHCAPATLLAVSPGHYDLYFRDA AQPGFGSLHACNLTIEAAATLLDARSRSPLDA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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