Pseudomonas fluorescens SF39a, NX10_RS02420
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain SF39a contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCGGTAAAACTCTTGTCAACATGGATTACCGGAGCTTGCTCCAGGCTCCAGCCGACAGACCAAAGCACCCCAGAATAATATTCAAACCAAGCAGCTGGC TCACTGTTTCTGTTATGACGCAAATCGGCTCTGTATTCTGCCCAGCGCATACTGTCTTTGACGAATCGTTTGTCTTCCGCAGTCAATCCGGAAAAGAAGG ACACCAGATTATTCCCCATCACCGTCGCACTGCCTTGGTCGGGAAGTGCTGAAACATTGTTCAAAACATCGCTCATTTCAATTATCCATCCGATTATTCA ATTTACTAAAAAAGTACATTCCAGATAGTCACAAGCATTTCCAGCGGAATGCCAATTCAATACTTGCGAAGAACTCGAAAAATCACAAAAGACAATGTAA ACATTCAATGTCGGCGCTCCTGAAAAAGGACAGCAGCCAGTTATCGATTGTCGCGTTATCATGTCGCCCGCTTCGCTGGACGCAGGATCTGGAGTATGAA
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| DNA Sequence for Gene |
>NX10_RS02420
ATGGGCGATTGGCTGACCGTTGTGGGTATTGGTGAAGACGGCTTCAAGGGCCTGGGCAAGAACGCCCGGCGTGCTCTGATGGGCGCTTCGCGGATCGTCG GCGGCCAGCGTCAGCTGGATCTGCTGCCGCCGTGCATTGGCGGCGAGCGGCAATTATGGCCGAGTCCGTTTTCCCTCGCGCCAGTGCTCGAGTCGCGTGG CGAGCCGGTCTGCGTGCTGGCCAGCGGTGATCCGATGTTTTACGGCGTCGGTGCCAGTCTGGCGCGGCAGGTACCGAGCGCCGAGATGGCGATCATTCCC GCCCCTTCGTCCTGCGCACTGGCCGCGGCGCGCTTGGGCTGGCCGTTGCAGGAGGTGACGATTGTGTCGCTGGTGGCGCGTCCGTTGGCGGCGCTCAATG CGCATCTGTTCAGCGGCGTGCGTCTGTTGCTGCTGAGTAACGATGGCAGCAGCCCGGCCGCGGTTGCGCAATTGCTGCGCGAGCGTGGTTTCGGCCCAAG TCGCATGACAGTTCTGGAGCATCTGGGCGGCGATGCCGAGCGGCGTATCGAACGCAGCGCCAGCGAATGGAACGACGCGTCCGTTGCCGATCTCAATGTC ATCGCCATCGAATGCCTGGCCGAGCCCGGCATCACCGGTCTGTCACGCCTCGCCGGCTTGCCCGATTCGGCATTCCGCCACGACGGCCAACTGACCAAGC GCGACGTGCGCGCCATCACCCTCGCCCGCTTGGCGCCGACGCCCGGTGAACTGCTCTGGGATGTCGGCGCCGGCAGCGGCTCGATCGGCATCGAGTGGAT GCGCACCCATCCGAGTTGCCGCGCCATCGCGATAGAGGCCGATGAGGGCCGTCAGCAACTGATCGAACACAACCGCGATGCGCTGGGCGTGCCCGGCCTG CAACTGATCCGTGGCAAGGCGCCGCAAGCGCTGGATCGCCTCGAACGGCCGGACGCTGTGTTTATCGGCGGCGGCGTCACCCGTGAGGGTGTATTCGAGA CCTGCTGGGACCAGCTCAAGCCCGGCGGCCGATTGGTTGCCAACGCCGTGACCCTGCAAAGCGAAGTCACCCTGATGCATTGGCGCGAACAATACGGCGG CGAACTGACGCGCATTCATGTCGCCCAGGCGCAACCGCTCGGCGAGTTCGACACTTGGCGTCAGGCCTTGCCGATCACCCTGCTGGAATTGGTCAAATCC CTCGATGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGAAACCGCCGAACAACCCGCGCCCCTGCGCAGCGGCCTGACCACCGGCAGCTGCGCCACCGCCACCAGCCTCGCCGCCGCGCGCCTGTTGCTCACCGAC ATCGCTGCCGACGCGGTGCAGATCACGCTGCCCAAGGGCAAACAGGTGCAGATGCGCCTGGAGTTCTGCCGCCTGAGCGAGGGCGGCGCCGAAGCCGGGA CGATCAAGGATGCCGGCGACGACCCTGACGTCACCCACGGCGCACTGCTTTACTCACAGGTGCGACTGTGTGCCGAGCCGGGGCTCCGCTTCAACGCCGG TGTCGGCGTCGGCACGGTGACCCGGCCGGGTCTGGTATTGGCCGTCGGCGAACCGGCGATCAATCCGGTGCCGCGCAAGATGATCAGCGATCACCTGGCC TTGCTCGCCGCCGAAACCGGCTACGTCGGCGGCTTCGAGGTCACGGTCAATGTCGAGGGCGGCGCAGAACTGGCGCTGAAAACCATGAATCCGCGGCTGG
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| Amino Acid Sequence |
>precorrin-6Y C5,15-methyltransferase
MGDWLTVVGIGEDGFKGLGKNARRALMGASRIVGGQRQLDLLPPCIGGERQLWPSPFSLAPVLESRGEPVCVLASGDPMFYGVGASLARQVPSAEMAIIP APSSCALAAARLGWPLQEVTIVSLVARPLAALNAHLFSGVRLLLLSNDGSSPAAVAQLLRERGFGPSRMTVLEHLGGDAERRIERSASEWNDASVADLNV IAIECLAEPGITGLSRLAGLPDSAFRHDGQLTKRDVRAITLARLAPTPGELLWDVGAGSGSIGIEWMRTHPSCRAIAIEADEGRQQLIEHNRDALGVPGL QLIRGKAPQALDRLERPDAVFIGGGVTREGVFETCWDQLKPGGRLVANAVTLQSEVTLMHWREQYGGELTRIHVAQAQPLGEFDTWRQALPITLLELVKS LDA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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