Pseudomonas fluorescens SF39a, NX10_RS01480

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain SF39a contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGTGCCAGCTCGGCATCATCGAACTGGCGATGGTGCACAACGCGGCAGCGAACAGTGCGGCGACCATCACCGGCTTACGTCCGATGCGGTCGGAAATCGG CCCGGTGATCAGCAGACCGAAGGCCAACATGCCGGTCGCCACCGAGAGGATGAGACTGCTCTGCGCCGCGTTGATCCCGTATTCGTGGGACAGCAGCGGC ATCATCGGTTGCACGCAATAGAGCAGCGCGAACGTCGCAAAGCCGCCACAGAATAGCGCCAGCACCGTGCGCATGAACGCCGGCGTGCCTTTTTCGATGT AGATCTCCTGCAGCTCGGCGCGCACATCGTCGTCGGCAGCGGGCGGGATTTCGTGGGCAAGGGGCGCGACAGCAGTTTTCACTTCAGACCTCGGAGAGCG CAGCCGGGCAGGCAATGAAAAAATCATATAGCTGGCTAATGTTTCTATCCAATATATTGTTCGACCTGTTTGATAGCTTCAGCGACCTAATGGGAATTCT
DNA Sequence for Gene
>NX10_RS01480
ATGGAACTGCGTCATCTGCGTTACTTCATTGCCGTCGCCGAAGAACTGCATTTTGGCCGGGCCGCACAGGTGCTGGGCATCTCGCAGCCACCGCTGAGCC AGCAGATTCAAGCGCTGGAGCAGCAGCTCGGCGCACGCCTGTTCGAGCGCACCAATCGTCGGGTCGAGTTGAGCGAGGCGGGCAGGTTGTTTCTGCAGGA GGCGCGGCTGGTGCTGGCGCAGGTCGACAAGGCAGCGGATGTGGCCCGGCGCGCGCAGCTTGGTGAGCTTGGCGAACTGAAGATTGGCTTCACCTCGTCG GCACCGTTCAATTCGACCATTCCGCAGGCGATTTTTTCCTTTCGTCAGCGCTTTCCGGCGGTGCATCTGAATCTGCGCGAAATGAGCAGCACCATGGTCG CCGATGCCTTGGTGGACGAGTCGATCGAAGTCGGCATCATGCGCCCGCTCGGATTGCCCGATTCACTGAGTGTTGTGGAGTTGATGCGCGAGCCATTGGT GGCGGTGCTCAGTTCCAAGCATCCGTTGGCCCAAGGCAGCGACGAAGGCCTGTTTCTCTCGGCGCTGGCGCTGGAACCGTTCGTGTTTTTTCCGCGCAGC TATGGCAGCGGGCTCTATGCGCAACTGCTAAACCTGGCCCGTGACGCCGGCTTCAGCCCGCATTTTGCCCAAGAGGCTGGCGAGGCGATGACCATCATCG GTCTGGTGGCGGCGGGCTTGGGTGTATCGGTGCTGCCAGCGTCCTACCAACGCATGCGCATCGACGGCGTGGTCTACCGTCCGCTGCTCGATCCCGAAGC GATTTCGGCGGTTTGGCTGGTGCAGCGCAAGGACCAGAAATCGCCGATGGCCAAGGCGTTTGTCCAACTGCTTACGCACAAGGTTGAGCCCCTGACGGTG TGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGCGNNGAAGGCGTCGGCCCAAACATCACAGATTTCAGGGCAACCGCACCAAATCCCCCTTCAAAGCCACCCGGGTAACAAAAACTCCTGCCCGGCACT CGTACGTATTCAAATCCTTGCGCACATGCTGGTCGTAGTAACTGACGATATTCACAACCGCATTCGCCCCGACCCGCTTGGCATCAGCCTGCAATTTGAT CAGATTCGACTGCAGCACCCATTCGCACGAAGCCTGGTCGCTCTTGTTGAAGCCGTTGGTTTTCAAATCACTGACCACCCCTTGGCGCAGCAACTGCTGA GTGCCCTGCGGCCCGTTGCCGATCAGGTAGAACTTCACACTGCCATCCAGCCGACCGGCGCGAATGGCGTCCGACAGCACGGTTTCGAAAGGCATGTACA TGAGGTTGGTGGCATGGCTGGCACTGGGCAGCAGGGCGATAAGCGCAGCGGCCATCAGGGCTTTCACTTGCATGGTCATCTCCTTTGACGGTGAAAGGGA
Amino Acid Sequence
>LysR family transcriptional regulator
MELRHLRYFIAVAEELHFGRAAQVLGISQPPLSQQIQALEQQLGARLFERTNRRVELSEAGRLFLQEARLVLAQVDKAADVARRAQLGELGELKIGFTSS APFNSTIPQAIFSFRQRFPAVHLNLREMSSTMVADALVDESIEVGIMRPLGLPDSLSVVELMREPLVAVLSSKHPLAQGSDEGLFLSALALEPFVFFPRS YGSGLYAQLLNLARDAGFSPHFAQEAGEAMTIIGLVAAGLGVSVLPASYQRMRIDGVVYRPLLDPEAISAVWLVQRKDQKSPMAKAFVQLLTHKVEPLTV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site