Pseudomonas fluorescens PA4C2, P909_RS26395
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens PA4C2 scaffold4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCGATCATCTGCGGCAAAGTCATCATCGGCGAGAACGTGTTCGTCGGCCCCTACGCCGTGATCCGCGCCGACGAAGTCGATGCCAGCGGCGCCATGGA CCCGATCACCATCGGCGCCAACTCCAACATCCAGGATGGCGTGGTCATCCACTCCAAATCCGGCGCAGCGGTGACCATCGGCGAATTCACCTCCATCGCG CACCGCTCCATCGTCCACGGCCCCTGCACGGTGGGCGACCGTGTGTTTATTGGCTTCAACAGCGTGCTGTTCAATTGCGCCGTGGGCGATGGATGCGTGG TGCGCCACAACTCGGTGGTCGACGGCCGCGATTTGCCCGCTGCTTTCTACGTGCCCTCTACGACGCGTATCGGCCCCAACACCGACTTGTCGCAGTTCCC GCCGGTGAGTGTCAGCGCCTCGGAGTTTTCCGAAGACGTGGCACGCACCAACGTCGACCTGGTACGCGGCTACAAAGCCCTGCAAAACGAGTTCTGAACC
|
|
| DNA Sequence for Gene |
>P909_RS26395
ATGAGCCGCCTGCTGATCCGCAACGCCCGCCTGGTCAACGAAGGCCAGGTATTCGACGCCGACGTACTGATCGCCAATGGCCGTATCGAGAAGATTGCCA CCAGCATTCAAGGCGATAACGAACCGGTGGAAATCGATGCCAACGGCCAGTGGCTACTGCCAGGGATGATCGACGACCAAGTGCATTTTCGCGAACCCGG CGCGCCGGAAAAAGGCAGCTTCTACAGCGAATCCCGCGCGGCGGTGGCCGGTGGCATCACCAGCTTCATGGACATGCCCAACACTCACCCGGCCACTCTG AGCCTGGAAGCCCTGGCCGATAAAAAGCGCCGTGCCGCACTGCACTCAGTGGCCAACTACGGCTTTCACTTTGGCGTGAGCAACGACAACCTCGACACCG TCGCGGCCCTTGCCCCCCGTGAAGTGGCTGGGGTCAAAGTGTTCATGGGTGCCTCCACCGGCAATATGCTGGTGGACGATCCACGCATTCTGGAGCGCCT GTTTGCCGAGGTGCCGACCATCCTGCTCGCTCACTGCGAACACACGCCCAGCATCCTGGCCAACGAGCAGCGCCTGCGCGAACGCTTCGGCGAGCATATT CCCGCCGTGGCTCATCCGCTGATCCGCGATGCCGAGGCCTGTTATCGCTCGTCATCGTTCGCCGTGGAATTGGCCAAACGTCATGGCACGCGTCTGCATG TGTTGCACCTGACCAGCGCGCGCGAACTCGCGCTGTTCGAAGACAAGCCCCTGGCCGACAAGCACATCACTGCCGAAGTCTGCGTGCACCACCTGCTGTT CGATGACCGCGATTACCACCGCCTTGGCCATCAGATCAAATGCAACCCGGCGATCAAGACCCGCGCCGACCGCGACGCGCTGCGTCTGGCATTGTTGAGT GACCGTCTGGATGTGATTGGCACCGACCATGCGCCACATACCTGGGCGCAAAAACAGTTGGCCTATCGGCAAGCACCCTCAGGCTTGCCCCTGGTGCAGC ATGCCCTGCCGGCGTTACTGGAGTTGGTGGCCGACGGGCATTTGCCCCTCACCACATTGGTCGCCAAGACCAGCCACCGCGTGGCCGACCTGTTCGCCAT TGCTGATCGCGGCTACGTGCGTGAAGGCTATTGGGCCGACCTGGTACTGATCAAACCGGAGCCTGCCGGCAAGCCGGTCAGCAGCCAACCCATCCTCGCC CGCTGCGGCTGGACCCCCTTTGCAGAGCGCAGCTTTCGCCACAGCGTGAGTACAACGTTGGTCAGCGGCCACCTGGCCTGGCACAACGGCCAGGTGGTCA ACAGTTGCCAGGGCTTGCCCCTGCAGTTTGGGCGTTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGCGGGGTTTAACGGTACCGCAATCGTTACCCAGCCACTGGGCGTGGCTGTCCAGGCTACCCTTCTGCTGGATACCGGTGGCATTGAAGGTACCGTTGA CGCTGGTGGTGAATTCTTTCTGGCTCTGGAACGTTGCCACGCCAGTGCCTTGGGCTTTCGGGCAACTGAAGCGGAATTTCCACTGGTTGCCGCTCTTGTC GGTGACTTCCTGTTTGCAGCCCGATTGGGGGTCGGTCAGCGGGATCGAATCGGAGGCCACCTGAGCCGGGGTCAGGCACACCTGCACGCCCTTACCGGCC ATGTTGATGCCTTGCTTTTCGAGCATGGCGCGCTGTTCAGGGGTCATCTGTTGCTTGAGTTGACCGAGGATCAGCGACAAGTCCGGCAGGTCCTGGTTAT CGACTTTCATATTGCTGGTGGTCAATTCCCACAAGCCCGGCGCCAGCATCTGCGCCTGCGCCGCCACAGGCAGCGACAAACCAACAACCATGGCCAAACC
|
|
| Amino Acid Sequence |
>dihydroorotase
MSRLLIRNARLVNEGQVFDADVLIANGRIEKIATSIQGDNEPVEIDANGQWLLPGMIDDQVHFREPGAPEKGSFYSESRAAVAGGITSFMDMPNTHPATL SLEALADKKRRAALHSVANYGFHFGVSNDNLDTVAALAPREVAGVKVFMGASTGNMLVDDPRILERLFAEVPTILLAHCEHTPSILANEQRLRERFGEHI PAVAHPLIRDAEACYRSSSFAVELAKRHGTRLHVLHLTSARELALFEDKPLADKHITAEVCVHHLLFDDRDYHRLGHQIKCNPAIKTRADRDALRLALLS DRLDVIGTDHAPHTWAQKQLAYRQAPSGLPLVQHALPALLELVADGHLPLTTLVAKTSHRVADLFAIADRGYVREGYWADLVLIKPEPAGKPVSSQPILA RCGWTPFAERSFRHSVSTTLVSGHLAWHNGQVVNSCQGLPLQFGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|