Strain | Pseudomonas fluorescens PA4C2 scaffold3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCTACGTGAACTACTTCCGCTCGATCCCATTGCTGCTGGTGATCACCTGGTTCTACCTGGCGGTGCCGTTCGTGTTGCGCTGGATCACCGGTGAAGACA CCCCGATCGGCGCGTTCACCTCCTGCGTCGTGGCGTTCATGATGTTCGAGGCCGCGTACTTCTGCGAAATCGTCCGAGCCGGTGTGCAGTCGATTCCCAA GGGCCAGATGGCGGCGGCACAAGCCATGGGCATGACCTACGGCCAGACCATGCGCCTGATCATCCTGCCCCAGGCGTTTCGCAAGATGACGCCGTTGCTG CTGCAACAGTCGATCATCCTGTTCCAGGACACCTCCCTGGTCTACACCGTGGGCCTGGTGGACTTCCTCAACTCCGCCCGCTCCAACGGCGACATCATCG GCCGCTCCAATGAGTTTCTGATCTTTGCCGGTGTCGTCTACTTCATCATCAGCTTTTCCGCCTCGCTGCTGGTCAAGCGTCTGCAAAAAAGGTTTGCCGT
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DNA Sequence for Gene |
>P909_RS25575
ATGATCTCTATCAAGAACATCAACAAGTGGTATGGCGACTTCCAGGTGCTGACCGATTGCAGCACCGAGGTTAAAAAAGGCGAAGTGATCGTGGTGTGCG GGCCATCCGGCTCGGGCAAATCCACCCTGATCAAGTGCGTCAACGCACTGGAACCGTTCCAGAAGGGCGACATCGTGGTCGACGGCACCTCCATCGCCGA CCCGAAGACCAACCTGCCAAAACTGCGCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAAAACCTGACCATC GCGCAGATCAAGGTGCTGGGCCGCAGCAAGGAAGAAGCCACCAAGAAGGGCCTGCAACTGCTCGACCGCGTGGGCTTGTCGGCGCACGCCCACAAGCACC CTGGCCAGCTCTCCGGCGGCCAGCAACAACGTGTGGCGATTGCCCGCGCCCTGGCCATGGACCCGATCGTCATGCTGTTCGACGAACCGACCTCGGCGCT GGACCCGGAAATGGTCAACGAAGTGCTCGACGTGATGGTGCAACTGGCCCACGAAGGCATGACCATGATGTGCGTGACCCACGAAATGGGCTTTGCGCGC AAAGTGGCCGACCGTGTGATCTTCATGGACGCCGGCAAGATCATCGAAGACTGCCCCAAAGAAGAGTTCTTCGGCGACATCAGCGCCCGCTCCGAGCGTG CGCAGCACTTCCTTGAGAAAATCCTGCAGCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAGCAACACATAGCTTGCCCTGTAAAAACTGGACCAATGTGGGAGCGGGCTTGCTCGCGAATGCGGCATGTCAGTCACTGATGCATCAACTGGCAGACTG CATTCGCGAGCAAGCCCGCTCCCACACTGAACCGCGCAGGTTGCACGCTCTGGTTGACCCAAGGCATCTGTGATGAAATGCGACCCCAATCAATATCGCG CCGCGCCGCCATCACTTGCCGTGAAGCCTCGTCTGATACGCCAACTGTTCCTGCCGCCGTTGATCATCGCCCTGATGGTCGGCCTGGGTTATATCGGCTT CTGGGTCAGTGACTACTACGGCATCCGCACCCTCAGCGACAATGGCGAACGCCAGTTGGAGTTGCACGCCCGTACCGTCGAAAGCGAACTGAGCAAGTAC ACCTACCTGCCCAGCCTGCTGGAACTGGAGTCCAGTGTTTCCAAACTGCTCGCCGACCCGAACCAGGAAACCCGCAAGACGGTCAACGACTACCTCGAAG
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Amino Acid Sequence |
>arginine ABC transporter ATP-binding protein
MISIKNINKWYGDFQVLTDCSTEVKKGEVIVVCGPSGSGKSTLIKCVNALEPFQKGDIVVDGTSIADPKTNLPKLRSRVGMVFQHFELFPHLTITENLTI AQIKVLGRSKEEATKKGLQLLDRVGLSAHAHKHPGQLSGGQQQRVAIARALAMDPIVMLFDEPTSALDPEMVNEVLDVMVQLAHEGMTMMCVTHEMGFAR KVADRVIFMDAGKIIEDCPKEEFFGDISARSERAQHFLEKILQH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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