Strain | Pseudomonas fluorescens PA4C2 scaffold3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCGGTGGGCTACTGGAATATCAGCCCGGAGCGCTTTCTCGACAAGCCTGTTGCGCAGGTTGACGAAGGCCTTATCGACTATTACGCCACCAATGCCTAC AGCATTCAGTACCTGCCCGACGGCAAGGTGCAGTATGAGATGACATCGGACAAGGTCGAACACTTGAAGGCTTCCGAAGTCAGCCTGCTGACCAATCCGG ACCTGAATCTGTATCGCGGCACCGAGTTTCCCTGGCACGTCACCAGCAAGCGTGGCGAGGTCAACCCGGACGGCACCGAAGTTGAACTGATCGACTCGGT TCGCGTCGCACGTACAGACGCGCAGAACCGCGACACCATCATTACCAGCAGTCGCATGACCGTATTCCCACAGAAGCAATATGCGCAGACCGAGCAAGAC GTTAGAATCGACGGCGCTGGCGGTGTATCGACTGGCAAGGGAATGAAAGCGTATTTGAAAGAAAGCAGGATACACCTGCTATCGAACGTAAGAGGACAGT
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DNA Sequence for Gene |
>P909_RS24375
ATGAGGCTCGTTAAAACCCTCCCTATTTTGCTCGGTCTGGGCGCAGCACTGGGAAGCGTGAGCGCCTGGGCTCTGCCGAACGATAGCCAGCAACCGATCC ATATTTCGGCTGACGATGCACAGCTCGATGACAAGAAAGGTGTCGCCACCTATACCGGCGGCGTGATCATCACCCAGGGCTCGATGAAGATTACCGGTAA CACGGTGACTCTGACGCGCACCCCCGCAGGCGACATTGACGTGGTGACGTCGGTGGGCAACCTGGCTTATTTCGAGCAGAAGCAGTCCCCCACCGACACC GGCCCGATGAAGGGCTACGGCAAGACCATCCAGTATCACGCCCAGCAGAATCGCATCGTGCTGATCGACCAGGCCAAGGTACTGAGCCCCGACGGCAACT CGACCGAAGGTGAAAAGATCACCTATGACACCGTCAAGCAGATCGCCAACGCCGGTCGCGCCAACGGCAACAAGGTCACCGCACCGCGCCCGCGCATCGA CATGGTTATCCAGCCGAAGAAGAAGGCCGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGGCAACCCTGAAAGCCCAGCACCTGGCCAAGGCCTATAAAAGCCGCCAGGTGGTACGCGATGTCAGCCTGTCGATCGAGAGCGGCCAGATCGTCGGTTT GCTCGGCCCTAACGGTGCCGGCAAAACCACCTGCTTCTATATGATCGTCGGGCTGGTCCAGGCAGACCAGGGTCGCGTATTGATCGACGACCTGGACGTC AGCCACCAACCCATGCACGGTCGTGCACGGGCAGGTATCGGCTATCTCCCCCAGGAGGCGTCGATCTTCCGCAAACTGTCGGTAGCCGACAACATCATGG CGATCCTCGAGACCCGCAAGGAACTCGATCGCGATGGCCGCCGCCAAGAGCTGGAAAGCCTGCTGCAGGAATTCCACATCAACCATATTCGCGACAACCT CGGCATGAGCTTGTCCGGTGGTGAACGTCGTCGCGTGGAAATCGCCCGCGCCCTGGCGACCGCGCCGAAATTCATCCTGCTGGATGAACCCTTTGCCGGT
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Amino Acid Sequence |
>organic solvent tolerance protein OstA
MRLVKTLPILLGLGAALGSVSAWALPNDSQQPIHISADDAQLDDKKGVATYTGGVIITQGSMKITGNTVTLTRTPAGDIDVVTSVGNLAYFEQKQSPTDT GPMKGYGKTIQYHAQQNRIVLIDQAKVLSPDGNSTEGEKITYDTVKQIANAGRANGNKVTAPRPRIDMVIQPKKKAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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