Pseudomonas fluorescens PA4C2, P909_RS23005
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens PA4C2 scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCTTTGCCATGCTCGATATCGACCACTTCAAGCGTGTCAATGACAGCCACGGCCACCCTATGGGCGACCGGGTGATCAAGAGCCTGGCACTGTTTCTCA AGCAGCGTTTGCGCAAGACCGATCACATCGGCCGCTACGGCGGTGAAGAGTTCGCCATCGTGATGCCCGACACCGACCTGGAATCGGCCTGCAAGGTGCT GGACGACATTCGTCGGCGCTTTGCAGAAATCCACTACCCCGCCCAACCGCAGGATTTGTGGTGCACCTTCAGCGCCGGCCTGGTGGAGCTGTGCGACGGT TCCGACAGCTTAATGATGGCCGCCCAGGCTGACGAAGCGCTGTACCGCGCCAAGGACGCCGGACGCAACCGCGTGCAAGCCGCTCGCACATCAAAGCAAA GTGCCATCTTTTCACCAGAATCCACCGATTCGGTCATAACGCTGTAATACAAACGCAATAAATTCAGGCGCTTATCTCTTGCCGTCGGTTGAAACCCCGC
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| DNA Sequence for Gene |
>P909_RS23005
ATGCGCCTGAAGCTGCTGACCAATCTCAATACCCTTCTGCTGGTGGCCGTGTGCCTGGCCCTCGGGGCGACGCTGTGGTGGTCGCAACGGGCGCTGGAGC GCCCGTACTTGTTGATGGAGCGCTACCTCGGCTTGTCCCAGATCTTTCAAAACCAGGCTGCTCGTAACATCGAGGACTACTTGGCCAGCGGCGATGCCCT GCGCCTGAGCAGTGCCACCCAGAGCCTGGAAAGCCTGCAGCTGCAACTGGGCGAACTGCCGCCCGAATTGGCGCAAAGCCTGCGGCCCAGCCTCGCGGAG TTGGAGACCTTCAGCAAGACCGACCTGTTGGCCGCCGGTAAATTGGCTGGCGACCCGCAAGCCCTGTTGCTGCAAGCCGAACGAGAACTGGGCGCGAACC TGGAACAACTGACCCAGTACGCCAGCGGCGTCAATTCTGCGGAGGCTGCGCGCTATATGCCGCCATTGCTCGCCGCCTCACAGCACCTGGGCAAGCTGTC TCTGGCCCGCGACAAGCTGGTCAGCAGCGGGCGCGCCGAGTTGGCTGCGGATGTCGAGCGCGAAGTGACCAACCTGAGAACCCAGGCCGACCTGCTCGGG CAACTGCCCTTATTGGGAATAAAGGCCAGCGCAGAATCCAACACCGACGATTTTTCCGCGCTGATGGGCCTGGAAAACACCGAAAAAACCGAAGCCCAGG ACACTGGCGTCGACCTCAAGCGCGAACTCAACAGCCTGTTGACCCGCTACCCCGCCGAGTTGCAGCGCACCCGCGAGCAGATCCAGCAACGCGCCGACCT CGCCGCCAGCACCCACCTAAAAATCACCAACGTGCAACACGCCATCGCCGGCCTCGAACCCGTGGTGCGCGCGCAACACGCGAAGATTCAGGGTGAAGTA CGCGTGATGCAGGGTGTGATGATTGGCCTGATCCTGCTGATCGCATTGCTGGTCGACACCCTGCAGCGCCGCCTGGCGCGCGTGCTGACCAACCTGGCGC CGGCCTTGTCGACCTGGGCCGAAGGCGACTTCAGCCAACCGATTGACTTAGGCAAGACCAACCGCGAGCTGCACGATATCGAGGCCTCCCTTAACCGCCT GCGCGCCTACCTGGTGGACCTGGTCGGCACCATCCGTGGCAATGCCGAAGAAGTGGCGGGCAGCAGCCGCGCCCTGGCCGAACTGAGCAGCGGCCTGCAC GACAGCGCCGAACGCCAGGCCGGCGACACCGCGCAAATCCGTGATTCCCTGGGCGAGCTGGAAGCCACCATCCAGCAAGTTGCCGGGGATGCCAGCCAGG CAGCCGGAGCCAGCCGCAGTGCGGGCCAAGCCGTGGAGCAAGGCCAGCGCGTGATCGGCCTGAGCCTCACCGGGCTGCATGCGCTGGTGGGCGAAGTGCA GCAAAACGCGCAGATGATCGAGAAACTTGCCGAAGAGTCCGCCACCATCGGCGGCGTGCTCACGGTGATTCGCTCGATTGCCGACCAGACCAACCTGCTG GCCCTCAACGCCGCCATCGAAGCCGCCCGCGCCGGTGAGGCAGGGCGTGGTTTCGCCGTGGTGGCCGACGAGGTGCGCTCCCTGGCCCAGCGTACCGCCG GCGCCACCGCCGAAATCCAGGGCCTGATCGCCGGCCTGCAAACCGCCGCGCTCCAGTCGGTAGAAGGCATGCGCGCCCAGGTCGAACACGCCGAAGCCAC CGCCCAGCAAGCCCAGGCGGCGGATGGCGCGCTGGATGAAATCGTCGGCGCGATCCAGACCATCTCCGACACTGCCGTACGTATTGCCGATGTGACCGCG CAACAAAGTGGAGCCGTGAGCGAGATACGCGACAACAGTGAGCGGATTCATCAATTGGGTGAGGATAATTTGCTGCGTATTGGCCAGGGCCGCAGCCAAG GCGAGCACCTGCTGGTGCTGGGCGGGCAACTGACTACCGCCGTGCAAGCCTTTCGCGTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGATATCCCGCCCGGTGTAGACCAAACGTGGGAGCGGGCTTGCTCGCGAATGCGGTGTGTCAGTCAATGCATCTTTAGCTGATCCACCGCTTTCGCGA GCAAGCCCGCTCCCACAATGGGTCTCCAGCGATCTCAGTGCCGTATCAGCGATGACTGGATCTGAAACCACAGTCACAAATTTTGCGCAATCCTCGCTAA TCGTGCCGGCTACTGCATAGAACTGGACAGTCACAAAGGCTTTGCGGCATAGTCGCCGGGTTCTGACGCACCCACACCAATAACAAGGAACAGCCAATGG CGACCTTACTGGTTCTTCACGGACCCAACCTGAACCTGCTTGGCACCCGCGAACCGGGCGTCTACGGGGCAGTGACCCTCGACCAGATCAACCTCGACCT GGAACGACGGGCACGTGAAGCCGGCCACCATTTGCTCTACCTGCAAAGCAATGCCGAGTATGAATTGATTGATCGCATCCATGCCGCGCGCGGCGAAGGC
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| Amino Acid Sequence |
>chemotaxis protein
MRLKLLTNLNTLLLVAVCLALGATLWWSQRALERPYLLMERYLGLSQIFQNQAARNIEDYLASGDALRLSSATQSLESLQLQLGELPPELAQSLRPSLAE LETFSKTDLLAAGKLAGDPQALLLQAERELGANLEQLTQYASGVNSAEAARYMPPLLAASQHLGKLSLARDKLVSSGRAELAADVEREVTNLRTQADLLG QLPLLGIKASAESNTDDFSALMGLENTEKTEAQDTGVDLKRELNSLLTRYPAELQRTREQIQQRADLAASTHLKITNVQHAIAGLEPVVRAQHAKIQGEV RVMQGVMIGLILLIALLVDTLQRRLARVLTNLAPALSTWAEGDFSQPIDLGKTNRELHDIEASLNRLRAYLVDLVGTIRGNAEEVAGSSRALAELSSGLH DSAERQAGDTAQIRDSLGELEATIQQVAGDASQAAGASRSAGQAVEQGQRVIGLSLTGLHALVGEVQQNAQMIEKLAEESATIGGVLTVIRSIADQTNLL ALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAGATAEIQGLIAGLQTAALQSVEGMRAQVEHAEATAQQAQAADGALDEIVGAIQTISDTAVRIADVTA QQSGAVSEIRDNSERIHQLGEDNLLRIGQGRSQGEHLLVLGGQLTTAVQAFRV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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