Pseudomonas fluorescens PA4C2, P909_RS13995

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens PA4C2 scaffold1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCACAGGGCCGGCCAAATCATCTTTGAGTCGCGCCAAGGCCTGGCGGGCGCGTTCCACCTGCACCACCAACGCTTGTGCCTGGGGCAGCAACGCCGCGCC GGCAGCGGTGAGGCTCAGCTTGCGCGTGGTGCGGTGCAGCAGTACCACGGCGAACTGCGCTTCCAACTGGCTGATGCGCTTGGATAACTGCCCTTTGCTG CAGCCCAATTGTGCAGCCGCCACGGTGAAACTGCCGGCTTCGATCAGCACGGCGAACGCCGCTAGGTCATCCATTTCGCTCATGGATTGTTTCCATTTGA AAACCAAAGGTTGCCTATTAGCGCGTTTATCCGACTAAAAAGCCACACTAGACTGAATGCAAACCCATACCACTGTAGGAGCGAGCTTGCTCGCGAAAAA CTCAAGATCGCCGCCGTGTAGTCAGTTTTACCGCGTGATCGTTGACGTTCTTCGCGAACAAGCTCGCTCCTACAGGGAATCAGCCCAGAGGAACAGCACG
DNA Sequence for Gene
>P909_RS13995
ATGAAAATCCTATTGATCGGTGCCAGCGGCACCATCGGTTCAGCGGTCAAGGCGGAACTGGCCCAGCGCCACGAAGTGATCAGCATCGGCCGCACCAGCG GCGACTTTCAGGTGGATATCAGCGATAGCGCATCGATCCGCAGGCTGTTCGAGCAGACCGGCAAGTTCGACGCCCTGATCTGCGCGGCAGGCAACGTCAA CTTCGTGCCCCTGGCAGACATGAACGACAGCGATTTCGAACTGGGCCTGCGTGACAAGCTGATGGGCCAGGTCAACCTGCTGTTGATCGGTCGTGAGTAC GCCAACGATGGCGCTTCGTTCACGTTCACCAGCGGCATTCTGAACCGTGATCCGATCCGCACCGGCGCTTCAGCAGCCCTGGTCAACGGTGCATTGGACG CCTTCGTCAAAGCGGCGGCCATTGAGTTGCCACGCGGCCTGCGCATCAACTCGGTCAGCCCGACGGTGTTGCTGGAAGCCATGGGCAGCTATGCCCCTTA TTTCCGCGGCTATAAACCTGCCCCCGCCGCCGATGTGGCGCTGGCTTACGCGAAAAGCGTCGAAGGCCTGCAAACCGGTCAGACCTTTATCGTAGGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGTGATATCTGTAAGAAACGCCTGAAGCTGGCAAGCGGGCTTGTGATGCACGGCCAGCCTGCGTAACGTGGCGGCACTTGCCTGGAGACCCGATAATGC GCGCCGCCCGTACCCTCGCCCTGTTTGCCTTGCTTCCTCTGTTCGCCGCCTGCCAATTGTTTGAAAGCGAGCCGGCCAAGCCATCGACTGTCGGGCTGAC CCGTATGCAGGGTGAGTTGACGGCGGTGGACGGCAAACTGCTGTTCCAGCCGTGTGGCGACCAGCGTAGCTACGTGGTCAACGACACCGGCGGCACCAGC ATCCTGCAGGAAGCGGCCTCGCTGGCCGGCCAGCAGGGCGTGCTGTTTGCCGACCTGCGTGGCAAGTTTTCCGGGGTCGCCAGCGGCACCCAGGGCTCAG TGGACCTGCAACAGCTGTATCGCGTCGAACGCTCGACCTCAGCGTGCTCCGACCCGGACTTCAAGCGCATGATCTTGCGGGCCAATGGCCATAAACCCGC
Amino Acid Sequence
>short-chain dehydrogenase
MKILLIGASGTIGSAVKAELAQRHEVISIGRTSGDFQVDISDSASIRRLFEQTGKFDALICAAGNVNFVPLADMNDSDFELGLRDKLMGQVNLLLIGREY ANDGASFTFTSGILNRDPIRTGASAALVNGALDAFVKAAAIELPRGLRINSVSPTVLLEAMGSYAPYFRGYKPAPAADVALAYAKSVEGLQTGQTFIVG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site