Pseudomonas fluorescens PA4C2, P909_RS12540 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens PA4C2 scaffold1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGGTGCTGCAAGCGCTGTTGGCCGAACAGGTGCCCGTGCGCGACATTCGCAGCATTGCCGAGGCCATCGCCAACAATGCCGCCAAGAGTCAAGATACTG CCGCTCTGGTGGCGGCGGTGCGTGTCGGCGTGTCCCGCGCAATCGTGCAAAGCATTGTAGGGACTGAGTCTGAGCTGCCTGTGATCACCCTGGAACCCAG GTTGGAACAAATATTGCTCAATAGTATTCAGAAGGCAGGGCAAGGCCAGGAAGAGGGCGTTTTACTGGAGCCAAGCATGGCTGAAAAGCTGCAGCGTTCG TTGATCGACGCCGCACAGCGCCAGGAAATGCAAGGCAACCCGGTGATCCTGCTGGTGGCCGGCCCGGTTCGCGCGATGTTGTCGCGGTTTGGACGCCTGG CTGTACCGAATTTGCACGTGTTGGCTTACCAGGAAATTCCTGACAATAAGCAAGTGACTATCGTCGCGACAGTTGGGCCCAATGGCTGAGGTAGTGGGTT
|
|
| DNA Sequence for Gene |
>P909_RS12540
|flhF
ATGCAAGTTAAGCGTTTTTTCGCCGCCGATATGCGTCAGGCCATGAAATTGGTCCGCGATGAGCTGGGCGCCGATGCCGCGATTATCGGTAACCGTCGGA TTGCCGGCGGTGTCGAGCTGACGGCTGCCCTGGATTACACACCCCAGGCGCTGGCCCCGCGCGTGCCGAACATGGAACTCGAAGACGAGCTGCGCAAGAC CGCCTCGCGTATTGTGTCGGCCCAGGCTGAACTGAGCATGCGTGGCGACAGCGATGCCAGCACCAATCGCCAGTTGTTCGCCGGCCTGCCGCTGACCGCT GCCGAGCCGCTGGTTGAACCCACCTTTGTCGAACCGCCGCGTCCTGCAGCGCCTGCCCCGGCTGCCGCAGTTGACCAGCGCGTGATCGACTCGATGCGTT TTGAACTCAATGGCCTGCGTGAATTGCTCGAGGTGCAGCTCGGCTCGCTGGCCTGGACCCAGCTGCAAGGCAGCAAGCCGCAGCAAGCCAACCTGTGGCG TCGCCTGCAGCGTATCGGCCTGTCCGGCCCGTTGTCCCGCGACCTGCTGGCCTTGACCGCCGAAGTCGAAGAGCCCCGCCAAGCCTGGCGCATGTTGCTG GCGCACTTGGCGCGCATGATCGCCACGCCGGAAATCGAACCCCTGGAAGAGGGCGGTGTGATCGCCATGGTCGGCCCCGCCGGCATGGGCAAAACCACCA CCCTGGCCAAGCTGGCCGCCCGCTATGTGCTCAAGTACGGCGCGCAGAATATCGCGCTGGTGAGCATGGACAGTTACCGCATTGGCGCCCAGGAGCAGCT CAAGACTCTGGGCCGCATCCTCAACGTGCCGGTGACCCATGTCGACCCGGGCCAGTCCCTGGCCAATGCCCTCGAGCCGTTGCTGCGCAAGCGCGTGGTG CTGATCGACACCGCAGGCCTACAGGCCAGCGACCCGGCGCTGCGCATGCAGCTCGAAAGCCTGGCCGGGCGTGGCATCAAGTCGAAAAATTACCTGGTGC TTGCAACCACCAGCCAGAAACAGGTTCTTACCGCTGCTTATCACAGTTACAAGCGTTGCGGCCTGGCCGGCTGCATCCTCACCAAGCTCGACGAAACCGC GAGCCTGGGCGAGGTATTGAGCCTGGCCATCAGCCATGAATTACCGGTTGCCTACCTCACCGACGGGCCGCGGATCCCGGATGATCTGCATCTGCCGCGC CGTCATCAGTTGGTCAGCCGTGCCGTGAGTGTGCAAATGCAAGACGAGCCTAGCGAGGAAGCGATGGCCGATATGTTCGCCGACCTTTACCACCACCCGG CTAAACGGGTGGGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGCAGGATGAACACCGTGAAATGTACCTACATCGATGGTCTGCAAGCGATTCACGCGGCCAAGCCATGTAGCCTGCGTCTAAGCAAGACAAGGTAAAGAA ATAAAATGGGCAGCATGCATCCCGTACAGGTGATCGCGGTGACCGGCGGCAAAGGTGGCGTCGGGAAAACTAACGTGTCAGTGAATTTGTCCCTGGCGCT GGCAGAGCTTGGCCGTCGCGTCATGCTGCTGGATGCTGACCTGGGCTTGGCGAACGTGGACGTTCTGCTGGGGCTGACACCCAAACATACCCTGGCCGAT GTGATCGAGGGCCGCTGTGAGCTGCGCGATGTGCTGCTCCAGGGTCCCGGAGGCATCCGTATTGTGCCGGCGGCCTCGGGCACCCAGAGCATGGTGCACC TGAGCCCCGCGCAGCATGCCGGGTTGATCCAGGCGTTCAGCGACATCGGCGACAACCTCGACGTACTGGTGATCGACACCGCCGCCGGCATCGGCGAATC
|
|
| Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRQAMKLVRDELGADAAIIGNRRIAGGVELTAALDYTPQALAPRVPNMELEDELRKTASRIVSAQAELSMRGDSDASTNRQLFAGLPLTA AEPLVEPTFVEPPRPAAPAPAAAVDQRVIDSMRFELNGLRELLEVQLGSLAWTQLQGSKPQQANLWRRLQRIGLSGPLSRDLLALTAEVEEPRQAWRMLL AHLARMIATPEIEPLEEGGVIAMVGPAGMGKTTTLAKLAARYVLKYGAQNIALVSMDSYRIGAQEQLKTLGRILNVPVTHVDPGQSLANALEPLLRKRVV LIDTAGLQASDPALRMQLESLAGRGIKSKNYLVLATTSQKQVLTAAYHSYKRCGLAGCILTKLDETASLGEVLSLAISHELPVAYLTDGPRIPDDLHLPR RHQLVSRAVSVQMQDEPSEEAMADMFADLYHHPAKRVG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|