Pseudomonas fluorescens PA4C2, P909_RS04900

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens PA4C2 scaffold1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGACAACCTCACGCTGATCGCCAAGGCCAACAAGGTCGATGTGCATGACCTGCAGCGCTGGAACAAGCTCAACGGCCAGGCCCTCAAGGTCGGCCAGACC CTGGTGATGCAGGACACGCGCAAAGTTGCGGCGAAAAAACCGGTGCAGTACAAGGTCAAGAAAGGTGACTCGCTGTACATGGTGGCAAAGCGCTTCAACG TTGAGATGCAACATCTCAAGCGTTGGAACCCGCGCACCGGCCAGGCACTGAAGCCAGGCCAGATGCTGGTGGTTTCCGGGCCGCGCTAAGGCCTCAGGCA TTGTGGGGAACCCATGTGGGAGCGGGCTTGCTCGCGAATAGGGTGGCACATCAACATCTCTGTTGACTGACACACTGCATTCGCGAGCAAGCCCGCTCCC CCATGGGCCTATAAGCCAATTTCAAGATGCTTTTTCCAACCGGAACAAGCTGTTACTGTACCGATCATAAAGCCCAAGCCGCCCGGATCGGATCTCTGAC
DNA Sequence for Gene
>P909_RS04900
TTGAAGCGTCCCCTCCTTCTACTAATAAGCCTGGCCTTGAGCTTTGCGGCGAACGCGACGATCACCGAGAGCCACGGTTATGCGCAGTTCGGCACACTCA AGTACCCGGCCAAATTCACCCATTACGATTGGGTAAACCCTGCAGCGCCCAAAGGCGGGACATTGCGGGTGATGGCATTTGGCACCTTCGATACGCTCAA CCCCTATACCTTCAAAGGTTCAAGCCCGGTTTCCACCGCCAACTTCCTGCAGTACGGCGTCAACGAGCTCAATGAACCCTTGATGGTGGGCACCGGGCAA TACGCGCCGTCCGGCGATGAGCCCACCTCCAGCTATGGCCTGATTGCCCAATCGGTGGAATACAGCGAGGACCGCAGTTGGGTGGTGTTCAACCTGCGCC CCGAAGCGCGCTTTCACGACGGCAAGCCGATTACCGCCGATGATGTGGCGTTCTCCTATCGCACCCTGCTGACCGAAGGCCACCCGCAGTACCGCACCAA CCTGCAGGAAGTGGCCCGGGTCGACATTCTCAACCCGCACCGTATCCGCTTTGTGTTCAAGCGCGCCGGCAACCCCCTGCTGATCCTGCGTCTGGGCGAG TTGCCGGTGCTGCCCCAGCACTATTGGAAAAACCGTGACTTCAAGTCCACCACTTTCGAACCGCCCCTGGGCAGTGGGCCTTACCGCATCACCAAGGTGG CGCCTGGGCGGCAACTGGTGTTTGAACGGGTCAAGGATTACTGGGGCAAAGACCTGCCGGTCAACCAGGGTTTCTATAACTACGACAAGGTCGAAGTGGA GTTCTATCGCGACAGCGACGTGGCCTTTGAAGCCTTCAAGGCCGGTGAATTCGATATTTATATCGAGCATCAGGCCAAGAACTGGGCCACAGGCTACAAC TTCCCGGCGGTCAACCGCGGCGATGTGATCAAGGCGCAGATCGCCCATCAGATCCCCACCCAGAGCCAGGGCCTGTTCATGAATACTCGGCGACCGGCAT TCAGCCAGGCCAAGGTCCGCGAAGCCCTGGGGTTGATGTTCGATTTTGAATGGACCAACCGCACGCTGTTCAGCAGCGCCTATAAGCGCTCGGTGAGCTA TTACCCCAACAGTGAATTCTCGGCCACCGGCCTGCCCGTGGGCCATGAGTGGTTGATGCTCTCGCCCTACCGCGACCAACTGCCGGCCGCGCTGTTTACC CAGCCGTTCAACTTGCCGCACACCGACGGCCGCGGCATCCCCCGCGAAACCCTGCGCCAGGCTCTGGCCCTGCTCAGCGAGGCCGGCTGGAAACTGTCGG GGCAGCGCCTGCTGGACAAGGACGGGCAACCGCTGCGCCTGGAAATCCTGCTGGTCAACCCGAACCTTGAGCGCATCCTGCAACCTTATGTCGAAAATCT GACCCGCATCGGCGTCGACGCCCGCTTGCGCACCGTTGACCGCGCACAGTACAAACAGCGCCTCGATCAATTCGATTTCGACATGATTCTGATGACCCTC AACCAGACCTTGAGCCCCGGCCTTGAACAGTGGCAGTACTTCCACTCCAGCCAGGCCGCAATCAAGGGCAGCAAGAATTACGCCGGTATCGCCAACCCGG TGGTCGACCACCTGCTGGACCAACTGCTGGCGGCGCAGACCCGCGAAGAACAACTGGCCGCCGGCCGCGCCCTGGACCGTGTGCTGCTGTGGCAGCACTA CAGCATCCCCAACTGGTACCTCAACTATCATCGCCTGGCGTACCGCAACCGGTTCGCCTTCGTCACCACGCCGCCCTACAGCCTGGGCCTGAGCGCGTGG TGGCTGAAAGCTTCGGAGAAAGCCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGTCCTTGCGTACTACCCTGCTCGCCAGCCTGTTGCTGTGCACCGCGGCGCACGCCGCGCCACAACATGCGCTGACCCTCTACAACGAGCCCCCCAAGTA CCCCGCCGACTTCAAGCATTTTGACTACGTAAACCCCGACGCCCCCAAGGGCGGCACCTTCCGCGAATCGGCCATGGGCGGCTTCGACAGCCTCAACCCC TACATCAGCAAGGGCGTGCCAGCGGACAACCTGCCGCTGATCTACGACACCCTGGCCACGCAGAGCCTGGACGAACCCATCACCGAATACGGCCTGGTGG CCGGCAAGATCGAAAAAGCCCCGGACAACAGCTGGGTGCGCTTCTACCTGCGCCCCGAAGCGCGCTTCCATGACGGCCACCCGATCCGCGCCGAAGACGT CGTATTCACCTTTCAGACCCTGATCAAGGAAGGCAACCCGCTGTACCGCAACTACTACGCCGACGTCGATGAGGTGGTGGCCGAAGACCCGTTGCGCGTG
Amino Acid Sequence
>ABC transporter substrate-binding protein
MKRPLLLLISLALSFAANATITESHGYAQFGTLKYPAKFTHYDWVNPAAPKGGTLRVMAFGTFDTLNPYTFKGSSPVSTANFLQYGVNELNEPLMVGTGQ YAPSGDEPTSSYGLIAQSVEYSEDRSWVVFNLRPEARFHDGKPITADDVAFSYRTLLTEGHPQYRTNLQEVARVDILNPHRIRFVFKRAGNPLLILRLGE LPVLPQHYWKNRDFKSTTFEPPLGSGPYRITKVAPGRQLVFERVKDYWGKDLPVNQGFYNYDKVEVEFYRDSDVAFEAFKAGEFDIYIEHQAKNWATGYN FPAVNRGDVIKAQIAHQIPTQSQGLFMNTRRPAFSQAKVREALGLMFDFEWTNRTLFSSAYKRSVSYYPNSEFSATGLPVGHEWLMLSPYRDQLPAALFT QPFNLPHTDGRGIPRETLRQALALLSEAGWKLSGQRLLDKDGQPLRLEILLVNPNLERILQPYVENLTRIGVDARLRTVDRAQYKQRLDQFDFDMILMTL NQTLSPGLEQWQYFHSSQAAIKGSKNYAGIANPVVDHLLDQLLAAQTREEQLAAGRALDRVLLWQHYSIPNWYLNYHRLAYRNRFAFVTTPPYSLGLSAW WLKASEKAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site