Pseudomonas fluorescens PA4C2, P909_RS04880

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens PA4C2 scaffold1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCGGGCAGCGTTTCCTGGAAATCTGGTCCGGCTTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTGCAGCCCAACTTCTGGTGGCTGCTG GGGATCATGTTGCTGTTTTCGTGGATGAGCCTGGTGGATGTGGTGCGCGCCGAGTTCCTGCGTGGGCGCAACCTGGAGTACGTGCGAGCGGCGCGGGCGC TGGGCATGCAGAACGGCGCGATCATGTTTCGCCACATCCTGCCCAATGCGATGGTCTCGACCATGACCTTCCTGCCCTTCATCCTCACCGGCGCCATTGG CACCCTCACCGCCCTGGACTTTCTCGGCTTCGGGCTGCCGGCAGGTTCGCCGTCGCTGGGTGAGCTGGTGGCCCAGGGCAAATCCAACCTGCAAGCGCCG TGGCTGGGCATGAGTGCCTTTGCGGTGCTGGCGATCATGTTGAGCTTGTTGGTGTTTATCGGCGAGTCCGCTCGCGATGCGTTCGACCCGAGGAAATGAG
DNA Sequence for Gene
>P909_RS04880
ATGAATCCGGACAATCTGATCGAAATCCGCGACCTCAGTGTCGAGTTCGTCACCGGCGAGCATCATCACCGCGTGGTCAACCACGTCAGTTTCGACATCA AGCGCGGCGAAACCCTGGCGCTGGTGGGCGAAAGCGGTTCGGGTAAATCGGTCACCGCCCATTCGATCCTGCGCCTGCTGCCCTACCCGTTGGCCAGGCA TCCGTCTGGCACCATCGAATATTCCGGGCAAGACCTGCTGACGCTCAAAGAGAAGACCCTGCGGCATATACGCGGCAATCGTATTGCGATGATCTTCCAG GAGCCGATGACCTCGTTGAACCCGCTGCACTCCATCGAAAAACAGATCAACGAAGTGCTCGGGCTGCACAAGGGCCTGACTGGCAAGGTCGCCACCCAGC GCACGTTGGAGTTGCTGGAACTGGTGGGCATCCCCGAGCCCCACAAACGCCTCAAGGCGTTGCCCCATGAGCTGTCCGGCGGCCAGCGCCAGCGGGTGAT GATCGCCATGGCCTTGGCCAACGAGCCTGAGCTGTTGATTGCAGACGAGCCGACCACCGCCCTCGACGTCACCGTACAGTTGAAGATTCTGGAATTGCTC AAGGAGCTGCAGGCGCGGCTGGGCATGGCGCTGTTGCTGATCAGCCACGACCTCAACCTGGTACGGCGTATCGCTCACCGCGTTTGCGTGATGCAGCAAG GTTGCATCGTGGAACAGGCCGATTGCGAGACGCTGTTCCAGTCGCCCCAGCATCCCTACACCCAGGAATTGCTCGCGGCGGAGCCCAGTGGCGGTCCGGC CAACAACACGGTCGGCCCACCGCTGCTGGAAGTGGACGACCTGAAAGTCTGGTTTCCGATCAAAAAAGGCTTTTTGCGCAACACCGTGGATTACGTCAAG GCCGTGGACGGCATCAACTTCAGCCTGCCCCAGGGGCAAACCCTGGGCATCGTGGGTGAAAGTGGCTCGGGCAAATCCACCCTGGGCCTGGCGATTTTGC GCCTGATCGGCAGCCAGGGCGGGATTCGCTTCGAAGGCCAGCAACTGGACCGCCTCAGCCAACAGCAGGTGCGCCCGTTGCGCCGGGAAATGCAGGTGGT GTTCCAAGACCCGTTCGGCAGCCTGAGCCCGCGCATGTGCGTCAGCGAGATCGTTGGCGAAGGCCTGCGCATCCACAAGATGGGCACGCCCGCCGAGCAG GAAGCGGCGATTATCGCGGCGCTCAAGGAAGTGGGCCTGGACCCCGAATCCCGGCATCGCTACCCCCATGAATTCTCCGGTGGCCAGCGCCAACGCATCG CCATTGCCCGAGCGCTGGTGCTCAAGCCTCGCCTGATCCTGCTGGACGAACCCACCTCGGCCCTGGACCGCACAGTACAACGCCAGGTGGTAGAGTTGCT GCGCGGCTTGCAGGCCAAGTACAACCTGACCTACCTGTTTATCAGCCATGACTTGGCGGTGGTGAAGGCACTGAGTCACCAATTGATGGTGGTCAAGCAA GGCCAGGTGGTGGAGCAAGGCGACGCCCGGGCTATTTTTGCCGACCCGCAGCATGCCTATACCCGGCAGTTGCTCAAGGCGGCTTTTCTGGTACCGGCCT GA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGTAACGCGGATGCAAATGCAGGAGTACTAACGCTATGTCGCCGAGCCCTATCGCCCGCCCCGCAGACACGCCGCGCTTCTGGCGCGACGAACGCCTGCC GTTCATCGAAGCGCGCACCATCGCCGACGGGCGCAAGGTCACCTACACCCGGCACGCCCACGAGCATTTTTCCATCGGCGCGATCACCACCGGCTGCAGC TATTACCACTACGGCGCGCGCACCTTCGACATCAGCGCCGGCACCGTGGTGCTGATGAACCCCGGCGATGTGCATGCATGCAACCCCATCCATGACCAGC CCTGGTCCTACCACATGCTGTACCTCGACACGCCTTGGCTGACCGACCTGCAATACCAGTTGGGGTTCAGTACCGACCAGGGCTACCGGCCCTTCGACAC GCCCCATACCCGCGACACCGCGCTGTACCACGGCTTGCTCGACCTGTACCGCACACTGGTGGATGAACAGGCCGAGTTGCTGCAAAAACAGAGCGCGCTG
Amino Acid Sequence
>microcin ABC transporter ATP-binding protein
MNPDNLIEIRDLSVEFVTGEHHHRVVNHVSFDIKRGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGTIEYSGQDLLTLKEKTLRHIRGNRIAMIFQ EPMTSLNPLHSIEKQINEVLGLHKGLTGKVATQRTLELLELVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELL KELQARLGMALLLISHDLNLVRRIAHRVCVMQQGCIVEQADCETLFQSPQHPYTQELLAAEPSGGPANNTVGPPLLEVDDLKVWFPIKKGFLRNTVDYVK AVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLIGSQGGIRFEGQQLDRLSQQQVRPLRREMQVVFQDPFGSLSPRMCVSEIVGEGLRIHKMGTPAEQ EAAIIAALKEVGLDPESRHRYPHEFSGGQRQRIAIARALVLKPRLILLDEPTSALDRTVQRQVVELLRGLQAKYNLTYLFISHDLAVVKALSHQLMVVKQ GQVVEQGDARAIFADPQHAYTRQLLKAAFLVPA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site