Pseudomonas fluorescens PA4C2, P909_RS01515
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens PA4C2 scaffold1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTTCGTCGTCTTCCGGCTCGGCGGCCAAAGCGGCATCCGCAGCCGCCTTGCGCTCACGACGAGCGTTGGCGGCGCGTTCGATGGGCCAGCGGATCAGCA CAAACACGATGTACAGGGCAAACGCGATCATCGTGTACATGAACAGGTCGGAAATGGCGCGCCAGGCGTTGTTGCCGACCTTGAGCACCAGGTCCAGGGC GGTAATGGCCACGGCCGGCGCAAACTGGGTCTTGACCGGGTCGACGATGGTCGGGCTGAGCAGCAGCACCGCCATCAGCAATTGCAGGGGCTCGCGCAGC CAGCGCCAGATCCAGCGGGTCATGCGCCACCACACCAACAGGCAGCCCAAAGCGGCGAAGGCGTAAAGGCCCCAAGCGGTCAGATAGTCGTTCTCGGTCA TGGTGTCCATGGCAAGGTTGGCAAACAGGCGGCTATGATAACGGCTTTTGCGTGTCGCGGCTGCAATGCCTGCCACCGTCTGCCAGATAGGGAATTATCC
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| DNA Sequence for Gene |
>P909_RS01515
ATGCCTATTTCCACCGCACCGATTGCCCGCAAGGCCCCAGGGCCAGACCCGTACGCCTGGCTGCAAGAACGCGACAACCCTGAGGTGCTCGACTACCTCA AGGCCGAAAACGCCTGGCAGGAAGCCCAACTGGCCGATCAGCAGGCGTTGCGCGAGACCCTGTTCGACGAGATCAAGGGCCGCATTCTGGAAACCGACCT GTCCCTGCCCTCCCCTTGGGGCCCGTATCTGTATTACACCCGCACCACCGCCGGTGACGAGTACGCCCGCCATTACCGCTGCCGCCGCCCGGCCGATGAC AGCAACCAGGTGGACGCCAGCAGCGAAGAACTATTGCTGGACCCGAACGTGCTGGCCAATGGCGGCTTTTTCTCCCTGGGCGCATTCAGCATCAGCCCCG ACCACCAGCGCCTGGCCTACAGCCTCGACACCAGTGGCGAAGAGATTTACACCCTGTTCGTGAAGGAATTGGCGACCGACAAGGTCAGCGAACTGGCGTT CGACAACTGCGACGGCAGCATGACCTGGGCCAATGACAGCCTGACCCTGTTTTTCGGCGAACTGGACGACACCCATCGTCCGCACAAACTGTATCGCTAT CGCCTGGACGGCACCGCAGCGCAGGAAGTCTTCCACGAGCCCGACGGCCGTTTCTTCCTGCATTGCTACCGCTCAAGCTCCGAGCGCCAACTGTTGCTGG CCCTGGGCAGCAAGACCACCAGCGAAGTCTGGGCGCTGGACGCCGAGCAACCGCACCTGGCCTTCACCTGCCTGGCGCCGCGGGTCGAAGACCACGAATA CGATGTTGACCACGGCAAGCGCAATGGCCAGTGGACCTGGTTTATCCGCAGCAACCGCGACGGCATCAACCATGCGCTGTACGTGGCCGCCGACACCGGC ACGCCGCCCACCGAAGCCGACTGGCAGAACCTGATCCCCCACAGCGATGAGGTCATGCTCGACGGCGTGAGCCTGAACGCCAACGCTATGACCTTGAGCC TGCGCATTGGTGGCCTGCCGGTTATCGAAGTGCACCCTGAGAACGTGCCGGCCTATCGGGTGCAATTGCCTGACGCCGCCTACAGCCTTTACGTGCAGAA CAGCCTGGAGTTTCCCAGCGACAAGATCCGCCTGCGCTATGAGGCCTTGAACCGTCCGGCCCAAGTGCGCCAACTCGACCTGGCGACAGGCGCGCAGGTC GTGCTCAAGGAAACCCCGGTGCTGGGCGTCTTCAACGCCGACGATTACGTCAGCCAACGCCTGTGGGCCACGTCCGCCGACGGCACCCAGGTGCCCATCA GCCTGGTGGTCAAGCGTGACCAGCTCGGCAAGCCGACGCCGCTGTACCTCTATGGCTACGGTGCCTACGGCTCAAGCCTGGACCCGTGGTTCTCCCATGC GCGCCTGAGCTTGCTCGACCGTGGCGTGGCGTTTGCCATCGCCCATGTGCGCGGCGGCGGTGAGCTGGGTGAGGCCTGGTATCGCAACGGCAAGCAGGAA CACAAGCAGAACACCTTCAGCGACTTTATCGCCTGCGCCGAGCATTTGATCGCCCAGGGCCTGACCACCTCCCGGCAACTGGCGATCAGCGGCGGCAGTG CCGGCGGCCTGTTGATCGGCGCGGTGCTCAACCAGCGCCCGGAGTTATTCCAGGCGGCGATTGCCGAAGTGCCGTTCGTCGATGTGCTCAATACCATGCT CGACCCGGAACTGCCGCTGACCATCACCGAGTACGACGAATGGGGCAACCCCGAGGACCCCGAGGTGTATGCGCGCATCAAGGCCTACGCGCCGTACGAG AACGTGCGCGCCCAGGCTTACCCGGCCACGCTGGTGATCGCCGGCTATAACGACAGCCGCGTGCAGTACTGGGAAGCCGCCAAGTGGGTGGCCAAGCTGC GCGATACCAAGACGGACGACAACCTGCTGCTGCTCAAGACCGAACTGGGTGCCGGCCATGGCGGCATGAGCGGGCGCTATCAGGGGCTACGTGACGTCGC CCTAGAATATGCCTTTGTGTTCAAGGCCCTCGGCCTGGTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGCCTGGCGTCTTTGGCTTGCTGTCGTTCTGCTGCAGGCCAGGGACCGTCTGGTCCTTGGGCGGTGCCGGCAGCACGATGGGCGCCAGCGGTGGCGCGC CATTATGAGTCTTGGGCGCTACGGGCGGCGTGACTTGCGGGTACAACGTGGGCGTTGGCGTGCCCGGCGCGCCTGGGGTTGGCGTGGGCGCGACCGGTAC GGTTTGTAACTCCTGAGCCTGCGCGTTACCCAATGCGAGCGCGCTCAACACAATGACCGTTAGAATGCTGCACTTCATCGATGGCTCCATGGCCTGACCG GAATGCCTTAAGGCTACTCCCAACCGCGCAAGAATGCCCTTCCCAATGAGATTTCCATGAAACGTTTCGTTCTGCTGGACACCACCCCAATCCCCGACAA CGGCGGCGCCTTGTGCCTGTTCGAATACGGCGAAGACTTTGTCATCAAGATCCAGGGCGGTGACGGTGGCCAGTTGATGAACACGCGCATGCACGGCTCC
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| Amino Acid Sequence |
>peptidase S9
MPISTAPIARKAPGPDPYAWLQERDNPEVLDYLKAENAWQEAQLADQQALRETLFDEIKGRILETDLSLPSPWGPYLYYTRTTAGDEYARHYRCRRPADD SNQVDASSEELLLDPNVLANGGFFSLGAFSISPDHQRLAYSLDTSGEEIYTLFVKELATDKVSELAFDNCDGSMTWANDSLTLFFGELDDTHRPHKLYRY RLDGTAAQEVFHEPDGRFFLHCYRSSSERQLLLALGSKTTSEVWALDAEQPHLAFTCLAPRVEDHEYDVDHGKRNGQWTWFIRSNRDGINHALYVAADTG TPPTEADWQNLIPHSDEVMLDGVSLNANAMTLSLRIGGLPVIEVHPENVPAYRVQLPDAAYSLYVQNSLEFPSDKIRLRYEALNRPAQVRQLDLATGAQV VLKETPVLGVFNADDYVSQRLWATSADGTQVPISLVVKRDQLGKPTPLYLYGYGAYGSSLDPWFSHARLSLLDRGVAFAIAHVRGGGELGEAWYRNGKQE HKQNTFSDFIACAEHLIAQGLTTSRQLAISGGSAGGLLIGAVLNQRPELFQAAIAEVPFVDVLNTMLDPELPLTITEYDEWGNPEDPEVYARIKAYAPYE NVRAQAYPATLVIAGYNDSRVQYWEAAKWVAKLRDTKTDDNLLLLKTELGAGHGGMSGRYQGLRDVALEYAFVFKALGLV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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