Pseudomonas fluorescens UK4, HZ99_RS23800
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain UK4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCCCGGAAAAAATCCCCTACGCCATCAAACGCTATGTCGATGAAACCGCGCGCCTCTATGGCGTGCTGGACCGGCGCCTGGCCGACCGCAGCTTCGTG GCCGGCGAGGCCTATAGCATTGCCGACATGGCGATCTACCCGTGGATCGTGTCCCACAAATGGCAGAGCCAGCGCCTGGAAGACTTCCCCCATCTGCATC GCTGGTTCAACCTGGTCAAGGAACGCCCCGCGACTGTGCGGGCCTATGACTTGGTACAGAAGGTCAACCCACCGAAATCCTGACCGTACCCGGTAGGAAC CGGCTTGCCGGCGAAGATCGTTAACGAAAACGCTGAGTGCCTGGATAAGCGTGGCGCCTGGTAGTTTTTCGCCGGCAAGCCGGCTCCTGCAGGGGTTTGT GAGTGTTTGAAAAAATTAGCATCGCCTCCCGCTTGCGTCGGTTCGCCGCGCTCACTAACGTAGCGCCTTTACTGACGCTACCCCCCGCAGGAGCTTTGCC
|
|
| DNA Sequence for Gene |
>HZ99_RS23800
ATGGCCTCGCCAGCCCTCTCACGTTTACTTCCCCGGTTCGGCGTTGCCGCGGCAGTGGCCAGTGCCTTGGGCCTGGCCGGTTGCCAGTCCCTGAACAGCC AGGACACTCTGCCTCCCGTCTCCGGTGTACAGCCGCTCAAGGGCCTGGCGCAAAATGTCTCTGTACGGCGCAACAGCCAGGGTATGCCGCTGATTGAAAG CAACACCTTCCACGACGCGTTGTTCACCCTCGGTTATGTGCACGCCAGCGACCGGATCAACCAGATGGTCACCCTGCGCCTGCTGGCCCAGGGCCGCCTG GCAGAAATGTCCGGGCCGGACATGCTGGATGTCGACCGCTTCATGCGCGCCGTCAACCTGAAGAAAAGCGCCAGCGAGCTGTACAACGCTTCGTCGCCAC GCCTCAAGCGCTTCTTCGAAGTGTATGCGCGCGGGGTCAATGCCTACCTGTTCCGCTACCGTGACAAACTGCCGACGGACCTGGCCCAGACTGGCTACAA GCCCGAGTACTGGAAGCCGGAAGATTCGGCGCTGCTGTTCTGCCTGCTCAATTTCAGTGAGTCGGCCAACCTGCAGGAAGAGTTGTCTGCCCTGGTACTG GCGCAAAAAGTCGGCGCCGACAAACTCGCCTGGCTGACCCCAAGCTACCCGGACGAGCCGCTGCCTGCGGCGGAGTCCGACAAGCTTAAGGGCGTCAACC TCGGGCAGATTCCCGGCCTTGCCACGCTCAACAGCATCAACGAGCGCCTGGGTAGCCTCAATACCCTTGGGGTTTCCATCTCCAGCAACTGGGCCATCGC CCCACAACGCAGTCGCAGCGGTCGCAGCCTGCTGGCGAATGACCTGTCGACGCCGATGCAGGTACCCTCCCTGTGGAATTTCGTACAAATCCGCGCGCCA AAATACCAGGCGGTCGGGGTGTCGATCGCCGGGATTCCTACGCTGTTGTCAGGCTTCAACGGCAAGGTGGCCTGGAGCATGAGCCAGGTGTCCGGCGATA CTCAGGACCTGTTCCTGGAGAAGGTCAGGCGCCAGGGCAGTGCGCTGTACTACGAGCACAACGGCAAATGGCTGCCGGCCATCGTGCGTAACGAAACCTT CTTCGCCAAGGGCCAGCGGCCAATTCGCGAAGCGGTGTACGAAACCCGCCACGGGCCGTTGCTCAACACCGCCCAGTCGCTGACCAGCGGCTACGGCCTA GCCCTGCAAACCGCCGATTTCAAGGACGACAAGAGCCTTGATGCGTTTTTCGACCTGTCCCGGGCACAGAACGTGGAAAAAGCCTCGGACGCCAGCCGCG AAATTCGTGCCATCCCCCTGAACATGGTATTTGCCGACGCCAGCAACATCGGCTGGCAGGTCACCGGGCGTTTCCCCAACCGCCGCGAAGGTGAAGGCCT GCTGCCATCGCTAGGCTGGGACGGGCGCTTTGACTGGGACGGCTACGCCGACGCGATGTTGCACCCCTATGATCAGGACCCGCCTCAGGGTTGGGTCGGC ACCGCCAACCAGCGCAGCGTGCCCCACGGCTACGGTATGCAACTGTCCAACTCCTGGGCCGCGCCGGAACGCAGCGAACGCCTGGCGCAACTGGCCGGCA ACGGCAAGCACGACAGCCGCAGCGTGATCGCCATGCAGTACGACCAGACCACACTGTTCGCCGCCAAACTCAAAGGCATGTTCCAGGCACCGGGCATGGC CCAGCCTCTGAAACAGGCGATAGATGCCCTGCCGGCCGCCGAACGGGGCAAGGCCCGGGAGGCCCTGGGCCGCCTGATGGCATTCGATGGGCGCCTGGCA GCCACCTCAGCCGACGCCGCGATCTACCAGTTGTTCCTTCAGGAAAGCGCCAAGCAGATTTTCCTCGACGAACTGGGCCCGGAAACCAGCCCCACCTGGA AGGCCTTTGTTAGCAACGCCAACCTGTCCTACGCGGCCCAGGCCGATCACCTGTTGGCCCGTGAAGACAGCCCTTTCTGGGATGACCTGCGCACCCCCGT CAAAGAAGACAAGCCGGCGATTCTCGCCCGCAGCCTGGCCGCCGCGATCACCGCTGGCGACAGCCAATTGGGCGCAGATCATAAAGCCTGGCAATGGGGC AAACTGCACAGCTACACCTGGAAGAACACCCGTGGCCAGGCCCTGCGTGGCCCGGTAGCGGCAGGTGGCGATCACACCACCTTGAACGCAGCGCCCTACA ACTGGGGGCAGGATTTCGCCACCACCCAAGTCCAGGCCCTGCGCTTGATTGTGGATTTCGGCCAGGTTGAGCCGATGATGGGCCAGGGCGGGATCGGCCA ATCCGGCAACCCTGCCAGCCCAAACTATGCCAATGGCATCGAGCCATGGCTCAAGGCACAGTACCTGAGCTTCCCGATGCAGCCGCAGAACTTTGACAAG GTGTATGGCAAGACCCGTCTGACCCTGATCCCTGGGAAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCGATGCAGGAACTGCCAGCGATCGCGGTGTACCCACCAGCACTTCGGTGCCTGGTGCATTGTTATCGCCGGCAAGGGTTCCTACACGGGGCGTGGAGG CGTCAGGCCACAGGCGCGGGTGGGGGCTCGTCCGGCAGGGTGGGTACGCCAGGCTCGATGGGTTGTTCGGGGGTATCGGGGTCAGGCTGGCCAGGAATGC CGCCGGCGGCGGGGTCGGCCATCAGGGACCAGGCCAGAACACCAATCTGATTGGGTTCCAGCCGGGCAAGTTCGGCGCTGATTCGCGGGTCGATCTTCAT AGGGTACTCCTCAAGCGTGGCTCGGCGCGCTGTGCACGCACCGAGGCAGTACACCCAATAGAGTGCCTGCCCGCTGACAAATTCCCTTGCCCTGTAAGAC GTTTCGATCAGGTACGTGGCAGGGTGACGCCGCGCTGGCCCTGGTACTTGCCGCCACGGTCCTTATAGGACACTTCGCACTCTTCATCGGATTCAAAGAA
|
|
| Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MASPALSRLLPRFGVAAAVASALGLAGCQSLNSQDTLPPVSGVQPLKGLAQNVSVRRNSQGMPLIESNTFHDALFTLGYVHASDRINQMVTLRLLAQGRL AEMSGPDMLDVDRFMRAVNLKKSASELYNASSPRLKRFFEVYARGVNAYLFRYRDKLPTDLAQTGYKPEYWKPEDSALLFCLLNFSESANLQEELSALVL AQKVGADKLAWLTPSYPDEPLPAAESDKLKGVNLGQIPGLATLNSINERLGSLNTLGVSISSNWAIAPQRSRSGRSLLANDLSTPMQVPSLWNFVQIRAP KYQAVGVSIAGIPTLLSGFNGKVAWSMSQVSGDTQDLFLEKVRRQGSALYYEHNGKWLPAIVRNETFFAKGQRPIREAVYETRHGPLLNTAQSLTSGYGL ALQTADFKDDKSLDAFFDLSRAQNVEKASDASREIRAIPLNMVFADASNIGWQVTGRFPNRREGEGLLPSLGWDGRFDWDGYADAMLHPYDQDPPQGWVG TANQRSVPHGYGMQLSNSWAAPERSERLAQLAGNGKHDSRSVIAMQYDQTTLFAAKLKGMFQAPGMAQPLKQAIDALPAAERGKAREALGRLMAFDGRLA ATSADAAIYQLFLQESAKQIFLDELGPETSPTWKAFVSNANLSYAAQADHLLAREDSPFWDDLRTPVKEDKPAILARSLAAAITAGDSQLGADHKAWQWG KLHSYTWKNTRGQALRGPVAAGGDHTTLNAAPYNWGQDFATTQVQALRLIVDFGQVEPMMGQGGIGQSGNPASPNYANGIEPWLKAQYLSFPMQPQNFDK VYGKTRLTLIPGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|