Pseudomonas fluorescens UK4, HZ99_RS23485
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0002949 | tRNA threonylcarbamoyladenosine modification |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03725
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR11735 | TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE | IPR000905 | Gcp-like domain | 3 | 97 | 6.0E-10 |
| Gene3D | G3DSA:3.30.420.40 | - | - | - | 95 | 184 | 3.7E-73 |
| SUPERFAMILY | SSF53067 | Actin-like ATPase domain | IPR043129 | ATPase, nucleotide binding domain | 4 | 107 | 6.91E-28 |
| Pfam | PF00814 | tRNA N6-adenosine threonylcarbamoyltransferase | IPR000905 | Gcp-like domain | 31 | 147 | 2.1E-26 |
| FunFam | G3DSA:3.30.420.40:FF:000097 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB | - | - | 4 | 107 | 9.6E-45 |
| SUPERFAMILY | SSF53067 | Actin-like ATPase domain | IPR043129 | ATPase, nucleotide binding domain | 111 | 213 | 3.37E-23 |
| Gene3D | G3DSA:3.30.420.40 | - | - | - | 4 | 201 | 3.7E-73 |
| NCBIfam | TIGR03725 | JCVI: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | IPR022496 | tRNA threonylcarbamoyl adenosine modification protein TsaB | 4 | 215 | 5.2E-61 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.