Pseudomonas fluorescens UK4, HZ99_RS21690
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain UK4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGGCCGCTATCGAAGCCAAGGTTGAGGAGCTGTCGAAAGTCTCCGCGCCAGTAGCTCAGAAGATGTACGCCGAGCAAGGCCAGCCAGCTGACGGTGCT GCGCAACAGGCAGAGCCTGAAGCCAAGCACGACGACGTTGTCGATGCCGAGTTCGAAGAAGTCAAAGAAGACCAGAAGAAGTAACTTGGTCGCCCGGTTG ACCGCTATCAAGCGGTGACTGGTAGGATGTCGCCGCGCGGGAGCTTGCTCCCGCGTTGGCGTGTCTGGGGTATGCGAATTTTTACAGCATGCGACAACGT TTGGATGCTGGCGGTGTGATCGGGAATGCTCCTGCTTTGCGATCGACAGTCACCGCGTTTTTAGCTGGGTCTCGGCTGAGAGCAGTAAAGACCAGGATCG TTGAATTTGACGTGAGTTGGGTCCGGGCCTGTATTGGGGCTCAACGAGTTTGGCAAGCTCAGGAGGGTTTTGCTGGACGTCCTTAAGAGTGCAAAGACTT
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| DNA Sequence for Gene |
>HZ99_RS21690
ATGGCAAAGCGTGACTATTACGAAGTGTTGGGTGTGGAGCGCGGCTCCAGCGAGGCAGACCTGAAGAAGGCCTACCGTCGCCTGGCGATGAAGCACCACC CGGACCGTAATCCGGATAACAAAGAATCCGAAGAAATGTTCAAAGAGGCCAACGAGGCCTACGAATGCCTGTGTGATCCGAACAAGCGTGCAGCCTACGA CCAGTACGGCCACGCCGGTGTCGATCCGGGCATGGGGGGCGGCGGTGCCGGTTTTGGCGGGCAGAACTTCTCCGATATCTTCGGCGATGTATTCAGCGAC TTCTTCGGCGGCGGTCGCGGCGGTCAGCGCGGCGGTGCCCAGCGTGGCAGTGACTTGCGCTACACCCTGGAGTTGAACCTGGAGGAGGCCGTGCGCGGCA CCAGCGTCAACATCCGCGTACCGACGCTGGTCAACTGCAAGCCGTGTGACGGTTCGGGTGCCAAGAAGGGCTCTTCGCCGATCACTTGCCCGACCTGTGG CGGTATTGGTCAGGTGCGCATGCAGCAGGGCTTCTTTTCTGTGCAGCAAACCTGCCCGCGTTGCCATGGGCAGGGCAAGATCATTTCCGATCCGTGCGAC TCCTGTCACGGCGAAGGGCGTGTCGAAGAGTACAAGACCTTGTCGGTGAAGGTGCCGGCGGGTGTCGATACCGGCGACCGCATCCGTTTGTCGGGTGAGG GCGAGGCGGGAACCCAGGGTGGCCCGACGGGCGATCTGTATGTGGTGATCAATGTGCGCGAGCACTCGATCTTCCAGCGCGACGGCAAGCACCTGTTCTG CGAAGTGCCGATCAGTTTTGTCGATGCGGCCCTGGGCGGCGAGCTGGAGATTCCGACCCTCGATGGGCGGGTCAAACTGAAGATCCCGGAGGGGACGCAG ACCGGTAAGCAGTTCCGTATCCGTGGCAAGGGCGTTGCGCCGGTGCGTGGCGGCGGGGCTGGCGACTTGATGTGCCGAGTGGCTGTCGAGACTCCTGTCA ATCTGGATCGCCGTCAGCGTGAGTTGCTCGAAGAGTTCCGCAGCTCGCTGGACGGTGATGGCTCCCATTCGCCCAAGACTGCTGGCTGGTTTGAAGGCGT GAAGCGCTTCTTCGGCGATCTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGACGTGGATATGCGACGTATAGCTGTAATGGGCGCTGCCGGGCGCATGGGCAAGAACCTGGTGGAGGCGGTGCAGCAGCGCTCGCCTCTCTCTGGGTTG ACTGCGGCAATCGTACGCCCGGGCAGTACACTGATCGGCGCCGATGCTGGCGAGCTGGCCTCATTGGGGCGGATCGGTGTGGCGTTGTCTGGCAGTCTGG AACAAGTGGCTGATGAGTTTGATGTGTTGATCGACTTCACCTTGCCCGAAGTGATGCTGAAAAACCTGGCGTTCTGCCGCAAGGCGGGCAAGGCCATGGT TATTGGCACCACCGGCCTGAATGCCGAGCAGAAGCAGTTGCTTGTCGCCGCGGGCAAGGACATTCCTATTGTGTTTGCCGCCAACTTCAGTGTGGGCGTC AACCTGTCGCTGAAGTTGCTCGACATGGCTGCGCGGGTGCTGGGCGATGATGCGGATATCGAGATCATCGAGGCGCATCACCGGCACAAGGTCGATGCGC
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| Amino Acid Sequence |
>molecular chaperone DnaJ
MAKRDYYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDNKESEEMFKEANEAYECLCDPNKRAAYDQYGHAGVDPGMGGGGAGFGGQNFSDIFGDVFSD FFGGGRGGQRGGAQRGSDLRYTLELNLEEAVRGTSVNIRVPTLVNCKPCDGSGAKKGSSPITCPTCGGIGQVRMQQGFFSVQQTCPRCHGQGKIISDPCD SCHGEGRVEEYKTLSVKVPAGVDTGDRIRLSGEGEAGTQGGPTGDLYVVINVREHSIFQRDGKHLFCEVPISFVDAALGGELEIPTLDGRVKLKIPEGTQ TGKQFRIRGKGVAPVRGGGAGDLMCRVAVETPVNLDRRQRELLEEFRSSLDGDGSHSPKTAGWFEGVKRFFGDL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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