Pseudomonas fluorescens UK4, HZ99_RS20595

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009236 cobalamin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF036428
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008276 protein methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF036428
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008168 methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00590
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.50.150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfn00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfn01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR02467 JCVI: precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE IPR012818 Precorrin-6Y methyltransferase 7 189 9.7E-41
PANTHER PTHR43182 COBALT-PRECORRIN-6B C(15)-METHYLTRANSFERASE (DECARBOXYLATING) - - 3 400 1.4E-119
PIRSF PIRSF036428 CobL_MTase IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase 1 401 0.0
Gene3D G3DSA:3.40.1010.10 - IPR014777 Tetrapyrrole methylase, subdomain 1 4 102 1.1E-10
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 213 400 1.2E-61
NCBIfam TIGR02469 JCVI: precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit 230 351 1.5E-34
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 212 377 8.04E-30
Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IPR000878 Tetrapyrrole methylase 5 188 7.7E-16
CDD cd11644 Precorrin-6Y-MT IPR012818 Precorrin-6Y methyltransferase 8 203 1.47259E-58
SUPERFAMILY SSF53790 Tetrapyrrole methylase IPR035996 Tetrapyrrole methylase superfamily 4 204 4.19E-36
CDD cd02440 AdoMet_MTases - - 252 346 6.64319E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.