Pseudomonas fluorescens UK4, HZ99_RS18750

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain UK4, complete genome. [Details]
DNA Sequence Upstream of Gene
GGCGGCAAGGCCTCGCTGCCCGTGCAGGTCGGGCTGACCACGGACAAGGGTTTCCCGCACAGGGGCGCGCTCGACTTCGTGGGCAACACCATTGACCGAA GCACCGGCACGATCCGCGCGCGCGCCGTTGTGCCCAACCCGGATGGGCGCATGGCACCCGGCATGTTCGCCCGGGCCAAGCTGTCCACCGGCGCGGCGCG CGAGGCCGTCCTGATCGACGATCAGGCCGTGGGCACCGACCAAGGGCGCAACTACGTGCTGGTCGTGGGCGAGAACAACCAGGCCCAGTACCGGCCCATC GAACTGGGGCCGGTGGTGGACGGGCTGCGCGTCATCAACGGCAGCCTGCAGGCCGGTGAGAAGATCATCATCAAGGGCCTCGTGCGCCCCGGCATGGCGG TCACGCCGCGCATGGTGCCCATGCAGCCGCCCGCGGCACCGGCCGCCGGCGCGGACCCCGCCAAGGCTGACGGCGCGGCCGGCTCGGCGGAGGCCCGCAA
DNA Sequence for Gene
>HZ99_RS18750
ATGAATTTCCCCCGCTTCTTCATCAACCGGCCCATCTTCGCCATCGTCCTGTCGGTGCTGATGCTGATCGCGGGCGCGATCAGCTACTTCCAGCTGCCGC TGAGCGAATACCCGCAGGTCACGCCTCCCACGGTGCAGGTCACCGCTAGCTATCCCGGTGCCAACCCGCAAGTGATCGCCGATACCGTGGCATCACCGCT GGAGCAGGCGATCAACGGCGTAGAAGGCATGATGTACATGCAGTCTCAGATGTCCACCGACGGGAAAATGGTGCTCACCGTCTCCTTCGAGCAGCATATC AACGCCGACATTGCGCAGATCCAGGTGCAAAACCGGGTCTCGCGGGCGTTGCCGCGCCTACCGCCTGAAGTTCAGCGCATCGGTGTTGTCACCGAGAAAA CGTCGCCGGACGTTCTCATGGTGGTGCATTTGCTTTCGCCTGGAGGTCGATATGATCCGCTGTACGTCTCCAACTACGCCACACTTCATGTGAAGGATGA GCTGGCTCGTACGCCAGGCGTCGGCGATGTCCTAGTCTGGGGCGCCGGGGAGTATTCGATGCGGGTCTGGCTCGAACCCGCCAAGGTCGCTGCTCGTGGG CTGATCGCGAGCGACGTGGTTGCCGCCATCCGCGAGCAGAACATACAGGTTGCCGCTGGTTCGGTTGGTCAGCAGCCGGATGCCTCGGCGGCGTTCCAGG TCACGGTCAACACTCTGGGCCGACTGTCGAGCGAGGAGCAATTCGGCGAGATCGTCGTGAAGACGGGCGCCGACGGCCAGGTAACTCGCCTGCGGGATGT CGCCCGCATCTCGATGGGGGCCGATTCCTACTCTTTGCGCAGCCTGCTCAATGGCGAGCCGGCGGTGGGGATACAGATCATCCAGAGCCCGGGCGCGAAC GCGCTGGATGTGTCTAGCGCGGTGCGCGCGGCAATGGACCGACTTCAAGCTAAGTTCCCCGACGGCATTGAGTATAGGATCGCCTACGACCCCACGGTCT TCGTGCGCGCCTCGCTCCAGTCCGTCGCCGTCACGCTGCTGGAGGCCATCTTCCTGGTGGTGATCGTGGTGGTGCTGTTCCTGCAATCCTGGCGCGCGTC GATCATCCCGCTGATCGCCGTGCCGGTCTCGCTGGTCGGCACGTTCGCGGTGATGCACATGTTCGGTTTCTCGCTGAACACACTGTCGCTGTTCGGACTG GTGCTGTCCATCGGCATCGTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTGGAGCGCCACATAGCGCTGGGCGAATCACCCAAGGACGCGGCGCGCA AGGCGATGGATGAAGTGACTGGCCCGATCCTGGCCATCACCTCGGTGCTGGCAGCGGTCTTCATCCCCTCGGCGTTCCTGTCGGGGCTGCAGGGCGAGTT CTATCGCCAGTTCGCGCTAACCATCGCGTTCTCGACCATCCTGTCGGCGATCAACTCGCTTACGCTGTCGCCAGCGCTGGCCGCCATCCTGCTCAAGCCG CACCACGGCGCGGCCAAGCCCGATCGCGTCACGCGCATCATCGACGGCGTGTTCGGCGGCTTCTTCCGCCGCTTCAACCGCTTCTTCGACCGCGCCTCGA ATTCCTACGTCGGGGGCGTGCGCCGCGCGGTGCGCGGCAGCGCCATCGTGCTGCTGCTCTACGTCGGCTTCCTGGGCCTGACCTGGCTGGGCTTCCACAA GGTGCCTGCGGGCTTCGTGCCCGCCCAGGACAAGTACTACCTCGTGGGCATCGCCCAGCTTCCGACCGGCGCCTCGCTGGATCGCACCGAGGCGGTCGTC AAGGAGATGACCAAGATCGCACTGGCTGAGCCGGGCGTCGAGAGCGTGGTGGCCTTCCCGGGCCTGTCGGTCAATGGACCGGTGAACCAGCCGAACACCG CGCTGATGTTCGCCATGCTCAAGCCCTTCGATGAGCGCAAGGACCCGTCGCTGTCGGCCTTCGCCATCCAGGGCAAGCTCATGGGCAAGTTCAGCCAGAT CCCGGACGGCTTCGTCGGCATCTTCCCGCCGCCGCCGGTGCCGGGCCTGGGTTCTATGGGCGGCTTTAAGCTGCAGATCGAGGACCGGGCGGGCCTGGGT CCCGAGGCGCTTGCACAAGCACAGGGCCAGATCATGGGCAAGGCCATGCAGGCGCCCGAGCTGGCGAACATGCTCGCCAGCTTCCAGACCAATGCGCCGC AGTTGCAGGTGGACATCGACCGGGTGAAGGCCAAGTCGCAGGGCGTGTCGCTGACCGAGGTGTTCGACACCCTGCAGGTCAACCTTGGCTCGCTCTACGT CAACGACTTCAACCGCTTCGGTCGCACCTACCGGGTAATGGCCCAAGCCGATGCGCAGTTCCGCATGCAGGCTGAGGACATAGGCATGCTCAAGGTGCGC AATGCAGCGGGCGACATGATCCCGCTGAGCGCGTTCGCGACCATCGAGCGCAGTTCCGGCCCCGACCGGGTGATGCATTACAACGGCTTCCCCTCGGCGG ACATCAGCGGCGGGCCAGCGCCGGGCTACTCATCCGGCCAGGCCACCGCCGCGATTGAGAAGATCGTGAGCGAATCGCTGCCTGACGGTATGACCTACGA ATGGACGGACCTGACTTTCCAGGAAAAGCGAGTTGGCAATACTGCTATCTATATCTTCGCGCTGGCGGTGCTGCTCGCCTTCCTGTTCCTGGCGGCCCAG TACAACAGTTGGTCGCTGCCGTTCGCTGTGCTGCTGATTGCACCCATGGCGCTGCTCTCGGCGATCGCCGGCGTCTGGCTCTCTGGGGGGGACAACAACA TCTTCACGCAGATCGGTTTCGTGGTGCTGATCGGCCTGGCCGCCAAGAACGCGATCCTGATCGTGGAGTTCGCCCGCGCGAAGGAAAGCGAAGGGGCCGA TCCGCTGGCAGCCGTGCTCGAAGCCGCGCGCTTGCGGCTGCGCCCGATCCTGATGACGTCGTTCGCCTTCATCGCTGGCGTGGTGCCGCTGGTGCTGGCC AGCGGTGCGGGCGCCGAGATGCGCCACGCCATGGGCATCGCGGTGTTCGCCGGCATGCTGGGCGTGACGGTATTCGGCCTGGTGCTGACGCCGGTGTTCT ACGTCGTGGTGCGCAAGCTGGCGCTGCGCCGCGAAGCGCGCCATGCCCGTGTCGGCATGACCGACCAGCACGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGCCAGGAGGACATACGACATGAAAACATCTTTCGCATTCACACGACCCGCCAGGACGCTGGCGCCGCTCGCCCTCGCGGCGGCGTTGACTGGCTGCTC CATGGCACCGAAGTATGACCGGCCCGCAGCGCCGATCGACACGGCTTATCCCTTGGGCGCGGCCTATGTGGAACCGGCGGCCGCGACGCCCGACGACGCG ATCACGGCCGAGATCGGCTGGCGGGACTTCTTCCGCGACCCGCTGCTGCAGCAGTTGATCGGCATTTCACTGGAGAACAACCGCGACATGCGCAAGGCCG CGCTCAACGTGGAGGCGGCTCAGGCGCTGTACCGTATCCAGCGTGCCGAGATGCTGCCGAACCTGGGCGTTTCCGCCCGCGGCGCGTCAGAGCGCGTACC GGCCGACCTCAGCACCACGGGGCAAAGCGACGTGCTCCGGCGCTACGACGTGGCCGGGGTGACGGCCGCCTGGGAACTGGACCTGTGGGGCCGCATCCGC
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MNFPRFFINRPIFAIVLSVLMLIAGAISYFQLPLSEYPQVTPPTVQVTASYPGANPQVIADTVASPLEQAINGVEGMMYMQSQMSTDGKMVLTVSFEQHI NADIAQIQVQNRVSRALPRLPPEVQRIGVVTEKTSPDVLMVVHLLSPGGRYDPLYVSNYATLHVKDELARTPGVGDVLVWGAGEYSMRVWLEPAKVAARG LIASDVVAAIREQNIQVAAGSVGQQPDASAAFQVTVNTLGRLSSEEQFGEIVVKTGADGQVTRLRDVARISMGADSYSLRSLLNGEPAVGIQIIQSPGAN ALDVSSAVRAAMDRLQAKFPDGIEYRIAYDPTVFVRASLQSVAVTLLEAIFLVVIVVVLFLQSWRASIIPLIAVPVSLVGTFAVMHMFGFSLNTLSLFGL VLSIGIVVDDAIVVVENVERHIALGESPKDAARKAMDEVTGPILAITSVLAAVFIPSAFLSGLQGEFYRQFALTIAFSTILSAINSLTLSPALAAILLKP HHGAAKPDRVTRIIDGVFGGFFRRFNRFFDRASNSYVGGVRRAVRGSAIVLLLYVGFLGLTWLGFHKVPAGFVPAQDKYYLVGIAQLPTGASLDRTEAVV KEMTKIALAEPGVESVVAFPGLSVNGPVNQPNTALMFAMLKPFDERKDPSLSAFAIQGKLMGKFSQIPDGFVGIFPPPPVPGLGSMGGFKLQIEDRAGLG PEALAQAQGQIMGKAMQAPELANMLASFQTNAPQLQVDIDRVKAKSQGVSLTEVFDTLQVNLGSLYVNDFNRFGRTYRVMAQADAQFRMQAEDIGMLKVR NAAGDMIPLSAFATIERSSGPDRVMHYNGFPSADISGGPAPGYSSGQATAAIEKIVSESLPDGMTYEWTDLTFQEKRVGNTAIYIFALAVLLAFLFLAAQ YNSWSLPFAVLLIAPMALLSAIAGVWLSGGDNNIFTQIGFVVLIGLAAKNAILIVEFARAKESEGADPLAAVLEAARLRLRPILMTSFAFIAGVVPLVLA SGAGAEMRHAMGIAVFAGMLGVTVFGLVLTPVFYVVVRKLALRREARHARVGMTDQHA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site