Pseudomonas fluorescens UK4, HZ99_RS17440
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain UK4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCGACCTGCCTCACGACGCAGCGTTCTTCATTGCCCAGCGCATCCGCTCCAACGTGCGTGAGCTCGAAGGCGCGCTCAAGCGCGTCATCGCCCATTCGCA CTTCATGGGCCGCGATATCACCATCGAGTTGATTCGCGAATCCCTGAAGGACCTGTTGGCGCTGCAAGACAAGCTGGTGAGTGTGGATAACATTCAGCGC ACCGTGGCCGAGTACTACAAGATCAAGATTTCCGACCTGTTGTCCAAGCGACGTTCGCGCTCGGTAGCACGTCCCCGTCAGGTGGCCATGGCACTCTCCA AGGAGCTGACCAACCACAGCCTGCCGGAAATTGGCGATGTATTTGGTGGTCGTGACCACACCACGGTCTTGCACGCGTGCCGCAAGATCAACGAACTTAA GGAATCCGACGCGGATATTCGCGAGGACTACAAGAACCTGCTGCGTACACTGACAACTTGATGAACACCAGCGCAGCTTATTAAGGCAAGGGACTAGACC
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| DNA Sequence for Gene |
>HZ99_RS17440
ATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCAGGCGTCGTCGAGCGCCGACAGACCTTGCCGGTACTTTCCAACGTAC TGTTGGTTGTCGAAGGCCAGCAATTGTCTTTGACCGGTACCGACCTGGAAGTCGAACTGGTTGGTCGTGTACAGCTGGAAGAACCCGCCGAGCCGGGTGA GATCACCGTGCCTGCGCGCAAGCTGATGGATATCTGCAAAAGCCTGCCCAACGACGCACTGATCGACATCAAGGTCGATGAGCAGAAGTTGGTGGTCAAG GCCGGTCGCAGCCGTTTCACCTTGTCGACCTTGCCAGCCAACGACTTCCCGACCGTGGAAGAAGGCCCGGGCTCGCTGACCTGCAGCCTGGAACAAAGCC GCCTGCGTCGTTTGATCGAGCGCACCAGCTTCGCCATGGCCCAGCAGGACGTGCGTTACTACCTCAACGGTATGCTGCTGGAAGTCTCCGAAGGCATCAT CCGTGCCGTGGCTACCGACGGTCACCGCCTGGCCATGTGCTCGATGAAGGCCGATATCGGCCAACCGGATCGCCATCAGGTGATCGTGCCGCGTAAAGGT ATCCTTGAACTGGCGCGTCTGCTCACCGAGCCGGATGGCAATGTCAGCATCGTCCTGGGTCAGCATCACATTCGTGCCACCACTGGCGAGTTCACCTTTA CCTCCAAGCTGGTAGACGGCAAGTTCCCGGATTACGAGCGCGTGCTGCCGAAGGGTGGCGACAAGCTGGTGATCGGTGATCGGCAGGCCTTGCGTGAAGC GTTCAGCCGTACCGCGATCCTGTCCAATGAAAAGTACCGTGGTATCCGTCTGCAATTGGCCAACGGCCAACTGAAAATCCAGGCTAACAACCCGGAACAG GAAGAGGCGGAAGAGGAAATCAGCGTTGATTACAACGGTGGTTCGCTGGAGATTGGCTTTAACGTCAGCTACCTGCTGGACGTTCTGGGTGTAATGACCA CTGAGCAAGTGCGCCTGATCCTGTCGGATTCCAATAGCAGTGCCCTGGTGCAAGAATCCGATAACGACGACTCGGCCTACGTTGTTATGCCGATGCGCCT GTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCATGCTCAGCAGACGCTAGATGTCCCTCAGTCGTGTCTCGGTCACCGCGGTGCGCAATCTGCACCCGGTGACCTTCTCCCCTTCCCCCCGCATCAATAT TCTCCACGGCGCCAACGGCAGTGGCAAAACCAGCGTGCTGGAAGCCATTCACTTGCTGGGCCTGGCTCGTTCCTTTCGCAGCGCCCGTCTGCTACCGGTG ATTCAGTACGAGCAATTGGCGTGCACTGTTTTTGGCCAGGTTGAACTGGCGCAAGGCGGGCATAGCAGCCTGGGGATATCTCGCGATCGCCAGGGGGAGT TCCAGATCCGTATCGATGGGCAGAATGCGCGCAGTGCGGCGCAACTGGCGGAAATTCTGCCCCTGCAATTGATCAACCCCGACAGCTTCCGTTTACTGGA GGGGGCACCGAAAATTCGCCGGCAGTTCCTCGATTGGGGAGTGTTCCACGTGGAACCAAGGTTCATGGCTACTTGGCAGCGCCTGCAGAAGGCCCTGCGG
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| Amino Acid Sequence |
>DNA polymerase III subunit beta
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLEEPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQKLVVK AGRSRFTLSTLPANDFPTVEEGPGSLTCSLEQSRLRRLIERTSFAMAQQDVRYYLNGMLLEVSEGIIRAVATDGHRLAMCSMKADIGQPDRHQVIVPRKG ILELARLLTEPDGNVSIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPKGGDKLVIGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQANNPEQ EEAEEEISVDYNGGSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALVQESDNDDSAYVVMPMRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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