Pseudomonas fluorescens UK4, HZ99_RS12685 (obgE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain UK4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTATTCAGGCTTAATTTCAGCCTAATTCCTCACTAGGAGAATTGACTCATGGCACACAAAAAAGCTGGTGGTAGTACCCGTAACGGTCGCGACTCAGAAG CCAAACGCCTTGGCGTTAAGATGTATGGCGGCCAGAAAATCATTCCGGGCAATATCATCGTGCGTCAGCGCGGCACCCAATTCCACGCCGGTTACGGTGT AGGCATGGGTAAGGATCACACCCTCTTCGCGAAAATCGAAGGCGTGATCAAGTTTGAAGTAAAAGGCGCGTTCAACCGCCGTTACGTGAGCGTTGTCTCG GCTTAATTGCGAGCTCGCTGGAAAAGCCCTGTCTTGCGACGGGGCTTTTTCGTTTGTGGGGTGAGTCTCTTGCAAAGCTGTTCGTGATGGGCGAAGGCAG CGGGATTTGCGGTCGCTGATTGAGGTCGCTGCGCTCATTTTTGCAAGAGTCTTATGTCTTGGTTTCTTAGGCTCGTCCATGCGGCGAGAGGCGTTTTGTT
|
|
| DNA Sequence for Gene |
>HZ99_RS12685
|obgE
ATGAAGTTCGTTGATGAAGTTTCTATCCGAGTAAAAGCAGGTGACGGCGGTAACGGTTGCATGAGTTTCCGTCGCGAAAAATTCATCGAAAACGGTGGCC CCAACGGCGGCGACGGTGGTGATGGCGGTTCCATCTATATGATGGCCGACGAAAACCTCAACACCCTGGTCGACTACCGTTACACCCGGCACTTCGATGC CGAGCGTGGCTCCAATGGCGGCAGCACCGACTGCACCGGCAAAAAGGGCGAGGACCTGGTGCTGCGCGTACCGGTCGGCACCACGATCATCGACTCTGCG ACCCAGGAAGTGATTGGTGATCTGACCAAGGCCGGCCAGAAGCTGATGGTTGTGCAGGGTGGCTGGCACGGCCTGGGCAATACCCGATTCAAGTCCAGTA CCAATCGTGCGCCACGCCAGACCACGCCAGGCAAGCCGGGCGAGCAGCGTGACCTGAAGCTGGAAATGAAAGTGTTGGCGGATGTTGGCCTGCTGGGCCT GCCAAACGCTGGCAAAAGTACCTTCATTCGCTCGGTGTCTGCGGCCAAGCCCAAAGTGGCCGATTATCCGTTCACCACCCTGGTGCCGAACCTGGGTGTG GTCAGTGTCGATCGCTGGAAGAGCTTCGTGGTTGCGGACATTCCGGGTCTGATCGAAGGTGCTTCCGATGGCGCGGGCCTGGGCATTCGCTTTCTCAAGC ACTTGTCCCGTACCCGTCTGTTGCTGCACCTCGTCGATATGGCGCCGCTGGATGAAACCAGTGCCCCGGACGCAGCTGAAGTGATCGTCAACGAGTTGGC CAAGTTCAGTCCGTCCCTGGCTGAGCGTGACCGTTGGCTGGTGCTGAACAAGTGCGACCAGATCCTCGAAGAAGAGCACGAAGAGCGGGTCAAGGAAATC GTTGATCGCCTGCAGTGGGAGGGGCCGGTCTACGTGATCTCTGCCATTGCCAAAGAAGGCACTGAGCGCTTGACCCGCGACATCATGCGCTACCTGGAAG ATCGTGCTGATCGCCTGGCTGCCGATCCGGCCTACAAGGCCGAGCTGGCGGATCTTGACCAGCGCATCGAAGACGAGGCGCGCGCGCAATTGCAGGCGCT GGATGACCAGCGTGCCCTGCGTCGCAGTGGCGTTAAGTCGGTCCATGATATCGGTGACGATGATTGGGACGAGGAAGATGTGGATGATGAAGATGGTCCG GAAATCATTTACGTGCGTGACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCTGTTGCGATAAACTTAAGCGCCGCTCAATCGAGCGGCGTTTTAGTATCTGGAAATCGGTAGTCACGAATAACGTTATGGGCGGCGCTGGGTCGCGTGG CCCTCAATCTAAGGTTGAAGATGATGCGGAGCAAAGTGACGGGTGCGCAACGCTGGGTCGTAAAGATCGGTAGCGCACTGCTGACGGCGGATGGCAAGGG GTTGGATCGTGCTGCCATGAGCGTCTGGGTTGAGCAGATGGTGGCCTTGCATGAGGCGGGTGTCGAGTTGGTGTTGGTGTCGTCCGGGGCGGTTGCTGCC GGGATGAGCCGCCTCGGCTGGACCGTGCGACCCAGCGCAATGCATGAGTTGCAGGCTGCTGCTGCGATTGGCCAGATGGGGCTGGTGCAGGCCTGGGAAT CCAGCTTCGCCGAGCATGGTCGCCATACCGCGCAGATTCTGTTGACCCATGACGACCTGTCCGACCGCAAGCGCTACCTCAATGCCCGCAGCACGTTGCG
|
|
| Amino Acid Sequence |
>GTPase CgtA
MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSIYMMADENLNTLVDYRYTRHFDAERGSNGGSTDCTGKKGEDLVLRVPVGTTIIDSA TQEVIGDLTKAGQKLMVVQGGWHGLGNTRFKSSTNRAPRQTTPGKPGEQRDLKLEMKVLADVGLLGLPNAGKSTFIRSVSAAKPKVADYPFTTLVPNLGV VSVDRWKSFVVADIPGLIEGASDGAGLGIRFLKHLSRTRLLLHLVDMAPLDETSAPDAAEVIVNELAKFSPSLAERDRWLVLNKCDQILEEEHEERVKEI VDRLQWEGPVYVISAIAKEGTERLTRDIMRYLEDRADRLAADPAYKAELADLDQRIEDEARAQLQALDDQRALRRSGVKSVHDIGDDDWDEEDVDDEDGP EIIYVRD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|