Pseudomonas fluorescens UK4, HZ99_RS10455 (sbcB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain UK4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACCACCCGCAGCCCCATGATCTGCTTGCCCGGTGAGCTGCCTTGGTTGAGCACTTCGAACAGCACCATGTACCACCAACTGACGAGAAACAGCAGGATCG AGCCCAGGCCGATGCCCAGGTTGCCGAGAAACGCCAGGACAATGAACAGGATGCCGAGGATCAGCCCGCGCAAGCCCAGGTCGAAGCCGAATGCCAAGGC ACGAGGTATCAGCCCGGCGGGGCGCAAGGGCAGGTCGATGCCCTCCGGGGTTTCGATCTGGTAGCGAGTGTCCAATGGTGCAGTGGGCATTGCGTTCCCT GGCAGTGCAGCGTGGCTGGACATGGGCAGCTTCATCAACTGGCCCGCAAGTTGAGAGGCCGATGCTAGCAGTGTCGTCGATGGAAGTAACACCTGAAAAT ACGCCAAGGTTTCACTGAATATTTATCCAGTACACATGACACTGGCCCCGGGTAGCGTCCAGCGCCTAGACTTTGTCGGTCTTCAGCACAGGAATAGCCC
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| DNA Sequence for Gene |
>HZ99_RS10455
|sbcB
GTGACCTCGATCTTCTGGTACGACTACGAAACCACCGGCATCAACCCGCGCAGCGACCGTCCACTGCAGGTCGCCGGGATTCGCACCGACCTTGACCTCA ATGAGATAGGGCCGCCGGTCAACCTCTATTGCAAACCCAGCGACGATATCCTGCCGCATCCGGCTGCGTGCATGATCACGGGCATTACTCCTGGCCAACT GGCGGAAAAAGGTCTGGCCGAAGCCGATTTCATGACGCGGGTGCATGCCGAGCTGGCGGCTCCCGGCACCTGCGGCGCGGGCTACAACACCTTGCGTTTT GACGATGAAATGACGCGCTACAGTTTGTATCGCAATTTCTTCGACCCATACGCACGTGAGTGGCAGGGCGGCAACAGCCGCTGGGACTTGATCGATGTGC TGCGCACAGCCTATGCGCTGCGCCCCGACGGCATCGTCTGGCCCGAGCAGGACGGGCGCGTGACCCTCAAGCTGGAGCGCTTGACGGCGGCCAATGGGAT TGACCATGGCCAGGCTCACGAGGCCCTGGCCGACGTGCGCGCCACCATTGCCCTGGCACGCCTGGTCCGGGACAAACAACCCAAGCTGTACGATTGGTTG TTTCAACTGCGCAGCAAACAGCGGGTCATGGATCAGATCCGCCTGTTGCAGCCCATGGTGCATATTTCCGGGCGTTTCTCGGCCGAGCGTCATTACCTTG GGGTTGTTCTGCCGCTGGCGTGGCATCCGCGCAATCGCAACGCGTTGATTGTCTGTGACCTGGGGCTCGACCCACAGGGGCTGCTGGATCTGGATGCACA AACCCTGCGCCAGCGCCTGTACACCCGCCGCGATGAGTTGGCTGAAGGCGAGTTGCCGGTGCCGCTCAAGTTAGTGCACATCAATCGTTGCCCGGTGGTC GCCCCGCTGAGTGTGTTGCGTGCGCAAGACCAGCAGCGTTTGAACCTGGATATGAGTGAAATCCAGGCCCGAGCACTGCGGCTAACTGACGCACAGGAAC TTTGGCAGGATAAATTGCCGGCGATTTATGCCGAAGAAGATTTCGCCGCAAGCGCCGACCCGGAGCAACAGCTCTACGACGGTTTTATTGGTGACCGGGA TCGGCGTTTATGTGAGCAAGTCCGGGCTGTGGAGCCTGCGCAATTAGCACGTCAGCAATGGCCTTTTGATGATCATCGTTTGCCGGAATTATTGTTTCGC TATCGTGCCCGTAACTTTGCGTACACCTTGGACGATGAAGAGCAACAACGCTGGAAACTATTCTGTCAGCAACGATTGTCAGATGTGGATTACGGTGCAC CCAATACCCTTGAGAGTTTCAATAAGGCCAGGCTTGAGTTGGACGTTAGTGCTACATCGTTTCAGCGTCAGGTTTTGGATGAATGGCAGGACTATGCAGA TGATTTACGCCAGCGTCTGAGTCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGGTGTTTTATAAAAAACGGGCAATAAAAAACGCCAGCGTGCTGGCGTTTTTTATTGTGTCGCGAATCTGGTCGAGACCTGGCGAGCCTTAGCCCAGCA GGGTAGCCCAACCTTCAACCACGTCACCGCCCCACTTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCACCTTTGGTTTCAATCACTTCACCGTTGTG CGGGTTTTTGTATTGCTTGACCTTGCGCGCGCGCTTGGTGCCGGTAACTTTTACCGCGCCGCGTGGTGCTTTAACTTTCGATTCCGGATCCAGCAGCGCA ATGATGTCACGCAGGGATTTGGAGTATTCACCCATCAGGGTGCGCAATTTGCCTTCGAATTCCAGCTCGGTTTGCAGTTTGTCGTCTTGGGACAGATTCT TCAAACGGGCTTGAAGCTCTTTGATAGCTTCTTCGGTGGCACGGTATTCGTTGATCAGGGACATGTGGACTACCTTATGCGGGGCGCTGAGGGATAGGGA
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| Amino Acid Sequence |
>exonuclease I
MTSIFWYDYETTGINPRSDRPLQVAGIRTDLDLNEIGPPVNLYCKPSDDILPHPAACMITGITPGQLAEKGLAEADFMTRVHAELAAPGTCGAGYNTLRF DDEMTRYSLYRNFFDPYAREWQGGNSRWDLIDVLRTAYALRPDGIVWPEQDGRVTLKLERLTAANGIDHGQAHEALADVRATIALARLVRDKQPKLYDWL FQLRSKQRVMDQIRLLQPMVHISGRFSAERHYLGVVLPLAWHPRNRNALIVCDLGLDPQGLLDLDAQTLRQRLYTRRDELAEGELPVPLKLVHINRCPVV APLSVLRAQDQQRLNLDMSEIQARALRLTDAQELWQDKLPAIYAEEDFAASADPEQQLYDGFIGDRDRRLCEQVRAVEPAQLARQQWPFDDHRLPELLFR YRARNFAYTLDDEEQQRWKLFCQQRLSDVDYGAPNTLESFNKARLELDVSATSFQRQVLDEWQDYADDLRQRLSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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