Pseudomonas fluorescens UK4, HZ99_RS09290

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008483 transaminase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01167
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfn02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfn01503 Cationic antimicrobial peptide (CAMP) resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfn00520 Amino sugar and nucleotide sugar metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.90.1150.10 Aspartate Aminotransferase, domain 1 IPR015422 Pyridoxal phosphate-dependent transferase, small domain 254 381 7.2E-37
FunFam G3DSA:3.40.640.10:FF:000040 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase - - 2 253 0.0
FunFam G3DSA:3.90.1150.10:FF:000030 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase - - 254 381 4.5E-48
PANTHER PTHR30244 TRANSAMINASE IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 6 378 2.8E-109
SUPERFAMILY SSF53383 PLP-dependent transferases IPR015424 Pyridoxal phosphate-dependent transferase 5 378 2.45E-113
CDD cd00616 AHBA_syn IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 17 375 0.0
Gene3D G3DSA:3.40.640.10 - IPR015421 Pyridoxal phosphate-dependent transferase, major domain 1 253 7.0E-95
PIRSF PIRSF000390 PLP_StrS IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 1 381 7.8E-110
Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 12 374 5.9E-126
Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB 2 380 70.886505

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.