Pseudomonas fluorescens UK4, HZ99_RS03860

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain UK4, complete genome. [Details]
DNA Sequence Upstream of Gene
TCCGCGCCGGGCACTTGAAGCAAGTGGGCCAGGACCAGGCCAAGGCGACGTTGATCCAGGATGACGGCAGCCTGTATCCGCTGCCGGGCAAGTTGCTGTT TGCGGAAATCTCCGTCGACCCCGGTACCGGGCAGATCATCCTGCGCAGCGAATTCCCCAACCCGGACCTCGACCTGCTGCCCGGCAGCTTTATCCGCGTG CGCCTGGAACAGGCGGTCGACCAGCAAGGCCTGAGCGTGCCGCAGCGTGCAATCACCCGCGACAGTGCCGGTATCCCCATGGTGTTGCGGGTGGACGCCG AACAGAACGTCAGCCAGCAAGCGGTGGAATTGGGCGCCGCGATCAATGATCGCTGGGTGGTCAACAGCGGCCTGAAGGCCGGTGATCGCATCATCGTCGA AGGCCTGCAACACGCACGCCCAGGTGAAAAAGTCGACGTGGATGCAAGCGCCGAACCTGTCGCCCAGGCCGCTGGCCAGTAATCAAAGGGATCAGAGACA
DNA Sequence for Gene
>HZ99_RS03860
ATGCCGCAGTTCTTTATTGACCGCCCGATCTTCGCCTGGGTGGTCGCCCTGTTTATTCTGCTGGCCGGCGCCCTCGCCATCCCGCAATTGCCCGTGGCGC AGTACCCCAACGTCGCGCCGCCGAAAGTGGAAATCTACGCGGTGTACCCGGGCGCGTCGGCGCAGACCCTGGACGAAAGCGTGGTCAGCCTGATCGAGCA GGAGCTCAATGGCGCCGACCACCTGCTGTATTTCGAATCCCAGAGCAGCCTCGGCTCAGCCACCATCACCGCGACCTTCCAGCCGGGCACCGACCCGGAA ATGGCCCAGGTCGATGTGCAGAACCGCCTCAAGGCCGTGGAGCCGCGCCTGCCCCAAGCCGTGACCCAGCAGGGCCTGCAGGTGGAAAAAGTGTCCGCCG GCTTCCTGCTGTTGGTGACCCTGACCTCCAGTGACGGCAAGCTCGACGACGTGGCGCTCAGCGATTACCTGGCGCGCAACGTGATGAACGAGCTCAAGCG CCTGGACGGTGTCGGCAAGGCCCAGTTGTATGGCGCCGAGCGGGCGATGCGGATCTGGATCGACCCGCAGAAGCTGATCGGCTTTAACCTGACCCCGGCC GACGTGAATGCCGCGATTGCCGCGCAGAACGCCCAGGTCTCGGCGGGCAGCATTGGTGATTTGCCGGGCCCCCATACCCAGGAAATCACCGCCTCGATCC TGGTCAAGGGCCAGCTCTCGACACCGGCCGAGTTCGCCGACATTGTGCTCAAGGCCAACCCGGACGGCTCCACCGTGCGCATTGGCGATGTGGCGCGGGT CGAGATCGGCAGCCAGGAGTACCAGTTTTCCACCCGGCTGAACGGCAAGCCCTCCACCGCCGTCAGCGTGCAGCTGTCGCCGGGCGCCAACGCCTTGAGC ACGGCGACCCTGGTGCGGGCGAAGATGGACGAGCTGTCGCGCTACTTCCCAGCCAACGTCGAGTACAAGATCCCCTACGACACCTCGCCGTTCGTCAAGG TGTCGATCACCAAGGTGATCTACACCCTGCTGGAGGCAATGGCGCTGGTGTTTGCAGTGATGTTCCTGTTCCTGCAGAACATCCGCTACACCCTGATCCC GACGCTGGTCGTACCGATTGCGCTGATGGGCACCTTCGCCACCATGCTGTTGCTGGGGTTCTCGATCAACGTGCTGACCATGTTTGGCATGGTGCTGGCC ATCGGCATCCTGGTGGACGATGCCATTGTGGTGGTGGAGAACGTCGAGCGAATCATGGTCACCGAGGGCCTGTCGCCCAAGGACGCCACGCGCAAGGCCA TGGGCCAGATTACCGGGGCGATCATCGGGATTACCCTGGTGCTGGTGGCGGTGTTTCTGCCGATGGCCTTCATGGCGGGCTCGGTGGGGGTGATCTATCA GCAGTTCTCGCTGTCGATGGCCACCTCTATCCTGTTTTCGGCGTTTCTCGCCCTGTCCTTGACCCCGGCCCTGTGCGCCACGTTGCTCAAGCCGATTGCC AAGGGCGAGCATCATGCCAAGGGCGGGTTCTTCGGCTGGTTCAACCGGCGCTTCGAGCAACTGACTGACCGTTATGAAGGCTGGGTCGCCTATGCCCTCA AGCGCAGCGGCCGCTATCTGCTGATTTACCTGGTATTGCTGGCAGGCCTGGGCTTTTTGTTCAGCCGCCTGCCCGCCTCGTTCCTGCCGGTGGAAGACCA GGGTTACACCATCACCGATATCCAACTGCCACCTGGTGCGAGCAAGAACCGCACGGTGCTGGTGGCCGAGCAGATCGAAGCCCATAACGCTACCGAACCG GGGGTGGGCGATACGACGATGATCATGGGCTTCAGTTTCTCCGGCTCCGGGCAGAATGCGGCACTGGCATTTACCACGCTCAAGGATTGGTCCGAGCGCA GCAGCGACGATTCGGCAGCCTCGATTGCCGATCGCGCCAATATGGCGTTTACCGAACTCAAGGATGCGATGGCCTATGCCGTGCTGCCGCCGCCGGTGGA TGGCCTGGGCACGTCCAGCGGCTTTGAGTTCCGCCTGCAGGACCGGGGCGGCGTAGGGCATGCCGCGTTGATGGAGGCGCGTACCGAGCTGCTGCAAGCG GCGGAAAAGAGCCCGATCCTGGCCAACGTGCGCGAAAGCGCCCTGGCCGAATCACCGCAAGTGCAGCTTGAGGTGGACCGCAAGCGCGCCAATGCCTTGG GCGTGTCGTTTGCCGATGTGGGCAATATCCTGTCCTCGGCTATTGGTTCGGCCTATATCAACGACTTCCCCAACCAGGGCCGCATGCAGCGGGTGGTGGT GCAGGCCGAAGGCGACCAGCGCAGCCAGGTCGAAGACCTGATGAAGATCCATGTGCGCAACAACGCCGGGAAGATGGTGCCGCTGTCGGCCTTCGTCGAA GCGCGCTGGGTCCAGGGCCCGGCGCAATTGACCCGTTACAACGGCTATCCGGCCATCGCCATTTCCGGTGAAGCCTCACCGGGCCACAGCACCGGCGAGG CGATGGAGGAAATCCAGCGCCTGGTGTCGCAACTGCCGGCCGGCCTGGGTCAGGAATGGACCGGTTTGTCATTGCAGGAGCGCTTATCGGGTTCCCAGGC GCCGCTGCTGTTGATGCTATCGCTGCTGGTAGTGTTCCTGTGCCTGGCGGCGCTGTATGAAAGCTGGTCGATCCCCACCTCGGTGCTGCTGGTGGTGCCG CTCGGTGTGTTGGGCGCGGTCATGGCGGTGTCGCTGCGCGGTATGCCCAACGACGTGTTTTTCAAGGTCGGCTTGATCACGATCATCGGGCTGTCGGCGA AAAACGCGATCCTGATCATCGAGTTTGCCAAGGACCTGTACGACCAGGGCGAAGACCTGATCGACGCCACGCTGAAAGCCGCACGCCTGCGCCTGCGACC GATCATCATGACGTCCCTGGCGTTTATCCTCGGCGTGGTGCCGCTGGCGATTGCCACCGGTGCCAGTTCGGCGAGCCAGCAGGCGATTGGTACGGGCGTC ATCGGCGGGATGATCACCGCGACACTGGCGGTGGTGTTTGTGCCGGTGTTCTTTGTCGTTGTCATGAAACTGGTGCGCAAACGCAAGGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAATGCCCCTGTAGGCGCCGGCAAGCCGGCGCCTACAGGAATAGGCTATGGTTGCTCACTCAACCTGCATTTGTGAGCGCCATGCCCTTCCTCGCCCGTA CCCACCCTCGCCTCTCCGCTGCTGCCGTCCTGGGACTGATAGTCGGTATTCTGGCGCCCCTCGATTCAATCCTTACCAAAGTGCTGATCGGTTGGAACGC CGGGGTCTGGACCTACCTGATACTGATGCTGTGGCTGACCCGTCGCGCCAAAGCCGAGGATGTAAAGCGCCTCGTCGAAATCGAAGACGAGAACGCCGGG CTGGTGCTGTTCATGGTGTGCATCGCCGCCATCGCCAGCCTGGCGACCATCACCTTCGAGTTGGTCGGGAGCAAGGACCTCACCGCCGCCGAACGCCTGC TGCATTACGGCTTTACCGGGGTGACGGTGATTGGCTCGTGGTTGCTGATCGGGGTGATTTTCAGCGTGCACTACGCCCGCCTCTATTACACCTGGGAAGG
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MPQFFIDRPIFAWVVALFILLAGALAIPQLPVAQYPNVAPPKVEIYAVYPGASAQTLDESVVSLIEQELNGADHLLYFESQSSLGSATITATFQPGTDPE MAQVDVQNRLKAVEPRLPQAVTQQGLQVEKVSAGFLLLVTLTSSDGKLDDVALSDYLARNVMNELKRLDGVGKAQLYGAERAMRIWIDPQKLIGFNLTPA DVNAAIAAQNAQVSAGSIGDLPGPHTQEITASILVKGQLSTPAEFADIVLKANPDGSTVRIGDVARVEIGSQEYQFSTRLNGKPSTAVSVQLSPGANALS TATLVRAKMDELSRYFPANVEYKIPYDTSPFVKVSITKVIYTLLEAMALVFAVMFLFLQNIRYTLIPTLVVPIALMGTFATMLLLGFSINVLTMFGMVLA IGILVDDAIVVVENVERIMVTEGLSPKDATRKAMGQITGAIIGITLVLVAVFLPMAFMAGSVGVIYQQFSLSMATSILFSAFLALSLTPALCATLLKPIA KGEHHAKGGFFGWFNRRFEQLTDRYEGWVAYALKRSGRYLLIYLVLLAGLGFLFSRLPASFLPVEDQGYTITDIQLPPGASKNRTVLVAEQIEAHNATEP GVGDTTMIMGFSFSGSGQNAALAFTTLKDWSERSSDDSAASIADRANMAFTELKDAMAYAVLPPPVDGLGTSSGFEFRLQDRGGVGHAALMEARTELLQA AEKSPILANVRESALAESPQVQLEVDRKRANALGVSFADVGNILSSAIGSAYINDFPNQGRMQRVVVQAEGDQRSQVEDLMKIHVRNNAGKMVPLSAFVE ARWVQGPAQLTRYNGYPAIAISGEASPGHSTGEAMEEIQRLVSQLPAGLGQEWTGLSLQERLSGSQAPLLLMLSLLVVFLCLAALYESWSIPTSVLLVVP LGVLGAVMAVSLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKDLYDQGEDLIDATLKAARLRLRPIIMTSLAFILGVVPLAIATGASSASQQAIGTGV IGGMITATLAVVFVPVFFVVVMKLVRKRKD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site