Strain | Pseudomonas fluorescens strain UK4, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ATCAAACCCCGGCGCTGTTGCGCCTGTGTCCTGTGCAGGCCTATACCGAGTGGCTCAGTGCCTCGGCGTTGGTGCGCGGCCCGCTTTTTCGCGGGATCGA TCGCTGGGGCAACCTGGGGGAGGAGGGGTTGCATGCCAATAGCGTGATCCCGTTGCTGCGCCAGGCCCTTGAGCGTGCAGGCATTGCCGCCGAGCAGTAC ACCAGCCACTCCTTGCGCCGGGGTTTCGCCACCTGGGCCCATCGCAGCGGCTGGGATTTGAAGTCGTTGATGGCGTATGTCGGCTGGAAGGACATGAAGT CAGCCATGCGCTATGTTGAAGCGACACCCTTTCTTGGCCTGACTCAGGCCCGTGCCCCGCTGGTTTAAGATTTCTTCTATTAATACAGTTGGTTGATAGC CAAAACCAATCGGCAGCATCAGGTTTGCCAATGAGCCATTGGCGATGAGACTGGGTAGGATTCACCCATCAACTTACTAACCCCTGACGGAGAGTCAACG
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DNA Sequence for Gene |
>HZ99_RS02240
ATGCCTATCATCAACAGCCAAGTAAAACCGTTCAAAGCGACCGCTTTCAAAAACGGCAACTTCGTAGACGTGTCGGACGCTGACCTGAAAGGCAAGTGGT CTGTCGTGTTCTTCTACCCAGCCGACTTCACTTTCGTCTGCCCAACCGAACTGGAAGACCTGGCTGACAACTACGCCGAGTTCCAGAAACTGGGCGTCGA GATCTACAGCGTTTCCACCGACACCCATTTTGCCCACGCTGCCTGGCACAACACTTCGCCAGCCATCGGCAAGATCCAGTACACCATGATCGGCGACCCG ACCCTGACCATCTCCCGCAACTTCGATGTACTGATCGAAGAAGCTGGCCTGGCAGACCGTGGCACTTTCGTGATCAACCCAGAAGGCCAGATCAAGATCG TTGAACTGAACGACGGTGGTGTTGGCCGTGACGCTTCCGAGCTGCTGCGCAAAATCAAGGCTGCTCAATACGTTGCTGCCCACCCAGGCGAAGTGTGCCC AGCCAAGTGGAAAGAAGGCGAGGCTACCCTGGCTCCGTCCCTGGACCTGGTCGGCAAGATCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCTGTGAAGCATCAAGGGCGGATCGCCGCACCTTAAGTAAGCTGCACCGCCCTCAAAAACGCCCGGGCGAGATTCGCTCGGGCGTTTTTTTTTACCGAA TTGATTTGAAATAGGAAATCGCCCGTATGTTGGACGCCAATCTTAAAGCTCAGTTGAAGTCATACCTGGAACGGGTCACCCAGCCGATCGAGATCGTCGC CTCCCTCGACGACGGTGCGAAATCCCAGGAAATGCTTGCCCTTTTGCAGGATGTAGCCAGCCTCACCACGCTGATTACCCTGAAAACCGATGGCAATGAT GGGCGCAAACCGTCGTTCTCCATCAACCGCCCGGGTGCCGATATCAGCCTGCGTTTCGCCGGCATCCCCATGGGGCATGAATTCACTTCGTTGGTGCTGG CCCTGCTGCAAGTCGGTGGCCACCCTTCGAAGGCCAGTGTCGAAGTGATTGAGCAGATTCGTAGCCTTAAAGGTGAGTTCAGCTTCGAGACTTACTTCTC
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Amino Acid Sequence |
>alkyl hydroperoxide reductase
MPIINSQVKPFKATAFKNGNFVDVSDADLKGKWSVVFFYPADFTFVCPTELEDLADNYAEFQKLGVEIYSVSTDTHFAHAAWHNTSPAIGKIQYTMIGDP TLTISRNFDVLIEEAGLADRGTFVINPEGQIKIVELNDGGVGRDASELLRKIKAAQYVAAHPGEVCPAKWKEGEATLAPSLDLVGKI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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