Pseudomonas fluorescens UK4, HZ99_RS01945 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain UK4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGATAAACGGGTAGCGCCCCTGGAAATCCGCCAGGCGCGGCAACAGCCAGCCCACCGCAAATGTCCCCACCGCTCCCACTGTCAGCACTTCGCGGTAGTG CCCGGCCTGGAACTGGCCGAGGGTCTGGGTGATACGGTCGAAGGACTCGCGCAGGACCGGCAACAGCGTCTCCCCCTCGCGGGTCAGCATCAAGCCACGG GGCAGGCGTTTGAACAGGATCACGTTGAGTTGTGCCTCCAGGCTCTTGACCTGATGGCTGACCGCCGCCTGGGTCACGCACAGTTCGATGGCCGCCCGAG TAAAGCTCAAGTGCCGGGCAGAGGCTTCAAACGCACGCAGTGCGTTAAGGGGCAAATGGGAACGCAACATGGTTTAAGCCCAAGTTATTCTAATGACTGG TGCGAGATATCATCGGTTGTCCAGGCTCGGCAAACTGCCTATCTTGGCCATGCCTGCGCAGGCAGCGGTTACCGATCATCCTCATGGAAGCGACATCATC
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| DNA Sequence for Gene |
>HZ99_RS01945
|ampC
ATGTACGAACACATGCGCAACGTCACGATTCTCGGCCTGTTACTGGGTGCCGGCAACTGCATGGCCGCCACCGATATCCGCCAGGCGGTAGACGCCACCA TCAAGCCACTGATGCAGCAACAGGCGATTCCCGGGCTGGCGGTCGCCATCCTGCACAACGGCAAGACCCAATACTTTAACTACGGTGTTGCCGCCAAGGA CAGCCAGCGGCCCGTCACCGAGAACACCCTGTTCGAGATCGGCTCGATCAGCAAAACCTTCACCGCGACCCTGGCCGGCTACGCCCAGGCCACCGGCAAG CTGAAGCTGTCGGAGCCGGCCAGCCACTACTTGCCAGCCTTGCGGGGCAGCCTGTTCGACCACATCAGCGTGCTCAACCTGGGCACCTATACGGCCGGCG GGCTACCGCTGCAGTTCCCGCCCGAGGCGGACAATGCGCAGCAAATGGTCAGCTACTTCCAGCATTGGAAAGCCGATTTCGCCCCCGGTACCCAGCGCCA GTATTCCAACCCCAGCCTGGGCCTGTTCGGTTACCTGGCGGCCCAAAGCCTGCAGCAACCCTTCGACGTGGCGCTGGAACAGACCCTGCTGCCCAGGCTC GGCCTCAAGCACACCTATCTCACGGTGCCCAAGGCACAGATGGGCCTGTACGCCCAGGGCTATGACAAGGCCGGCAAGCCGGTGCGCGTCAGCCCCGGGG CGCTGGACAGCGAAGCCTACGGGGTGAAGACCAGCCCGGCAGACCTGGCCCGCTACATGGCGCTGAACATCGACCCGACGGCGCTGGAGCAGCCGCTGCA ACAAGCCATTGCCGCCACCCATACCGGCTACTACACCGTGGGCAACACCACCCAGGGCCTGGGTTGGGAGATGTACCCTTACCCGCTGGGCGTGGATGAA CTGGTCGCCGGCAATTCGACGCCCATGGCCATGGAACCGCACCCGGTCAACTGGCTGGCACCGGCACAACCCCTGCGTGCCGACACCCTGGTGAACAAGA CCGGCTCGACCGGCGGCTTTGGCGCCTATATCGCTTATGTACCGAGCAAAGGTATCGGCGTGGTGATCCTGGGGAACAAGAACTATCCCAATGCCGAGCG GGTGAAAGCCGCCCATGCGATCTTGCAGGCCATGGAGCCATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTCACTTTTTTTGAACCGACAGACTCCCAATGTGGGAGCGGGCTTGCCCTCTCCCACAGGGCAGCCTCTGCGCAAGCGATATCTCAGGCCGCCAGGCCTT TACCGGCCCGTTCCAGGTTGCGCCACAACCAGGGCGGCAACACCTGCGGGTCGAGGCTGTCGATCAGGTTCTTCAGGCCCAACCCCAACTCCGTATCCCC CTCGATCAGCAGCCGCCGGCGAAAGAACAACGTGTCCGGATCTTCCTGGCGGCTGGCCAATAACAGGAACTCGCGCCAGTTGCCGCTGATGGTCACCTGG GCCTTGGCCTGTTCAGCGATGCGCAGTCCATCGCGACCCAGGGTCAGGTACCAGCGCAAGCCCAGGTCGGGAATGCGCAGGCACATCCAGCGCCCGCGCA GCAGCTCAAAGCCGCCATCGCGCAAGGGTTCGGCCAAACAGCGATTCAACGCCTGTTGCAAGGCCATGCGTTGCACCACAAATGGCACCTTGCGCATCAA
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| Amino Acid Sequence |
>class C beta-lactamase
MYEHMRNVTILGLLLGAGNCMAATDIRQAVDATIKPLMQQQAIPGLAVAILHNGKTQYFNYGVAAKDSQRPVTENTLFEIGSISKTFTATLAGYAQATGK LKLSEPASHYLPALRGSLFDHISVLNLGTYTAGGLPLQFPPEADNAQQMVSYFQHWKADFAPGTQRQYSNPSLGLFGYLAAQSLQQPFDVALEQTLLPRL GLKHTYLTVPKAQMGLYAQGYDKAGKPVRVSPGALDSEAYGVKTSPADLARYMALNIDPTALEQPLQQAIAATHTGYYTVGNTTQGLGWEMYPYPLGVDE LVAGNSTPMAMEPHPVNWLAPAQPLRADTLVNKTGSTGGFGAYIAYVPSKGIGVVILGNKNYPNAERVKAAHAILQAMEP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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