Pseudomonas fluorescens UK4, HZ99_RS00175
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain UK4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCATGCATGTGCCCGTTCACGGCGAAGCCCGGCTGGCCAGGCTGTGTACCCGGTTTATCGGGAACCCGGCCGATGACAGCAGCCTGGAGTCCTGGGCCGA TACCCTGAACATGAGCCCGCGTACCCTGAGCCGGATTTTCCAGCGGGAACTGGGCATGAGCTTTGGTGAGTGGCGCAAGCGTGCGCGCCTGGCCTTGAGC CTGAAGTTGCTGGCCCAGGGGGCCTCGATCCTGGAAGTGGCGCTGGAACATGGGTATCAGAGCCCCAGTGCATTCAGTGCAATGTTTCGCCGTTCGTTGG GTTATCCACCGAGTCATTTCCGCCCCCGGGCCTGATGTTGCTTCATGTAACCCAATTGTCCATTTGGCGACGATACATGGCCCTGGCGCGGGCGAATCCG CCTGGGCGCATGCCTAATCTGCAACGCTCATTCTTCAGCGAGCTTTGTGATGCCCAGCCTTGTCGTTCATCCCCCCACTAGCACTCGATCTCCGGCAGCC
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| DNA Sequence for Gene |
>HZ99_RS00175
CTGGCCCTGCTTCTGCTGGGCGCGCTGGCCGGATGCAGCGGCCTGCCCGACGAGCCGGCGGCGCCGTTGACGGTCCCGGCGGCACCGCAATTGTCCCGTG GTGCGGCGACCCAGGCGTTACCCGAGCGCTGGTGGCAGCTGTACCGTGACCCGCAATTGGATCTGTGGGTCGAGCAGGCCTTGAACCACAACAAAGACCT TGAGGCCGCCGCCGCCCATGTCGACGCGCTGCTGGCCCGCCTGGAGCAGGTCGACCGCGAGCGCCGACCCTCGACCTTGTTGACTGACGGCGTGGGCTAC GGTCGCCGCCGAGATGACCAGACCCTGGCCCAGGCCACGGGTGAGCGAGCGGATGCCGAGTGGAGCCATACCCCTGGATTCTCCCTGAGCTACACCCTGG ACCTGTGGGGCGAGGTGCGTTACCGCCTGGCGGCCGCCCGCGCCAATGCCGATGCGGCGCGGGCGCTGGAGGATGAATGGCGGGTGACAGTGGCTGCACA GACCACACGGGCCTATGGCCAGGCCTGCGTCTATGCGTTCAGCCACCAGGTGCAGCGTCATTGGGTGCAGGTGTTGCAACGCAGTGTCGACGTCACGCGC AAGCTGCAGCAGGCCGGGGCGGCGACCGCGCTGGACCTGGCGCGTCTCAATGGCCTGCTGGAAGAAACCCGTGCGCCGTTGCCCATGCTGGCTGCCCGCC ATCAGGCCGCGCTGTATGAACTGGCAGTGCTCAGTGGGGTACCGCCGTTGGAGGTGGCCCGGCAAACCTGTTCCCAGCGCCTGCAGTTGCAGGTGCCATT GCCTGTGGGGGATGGCTGGGCGCTGGTGCAGCGGCGCGCCGATATCCGGCGGGCCGAGCGCCAGCTGCAAGCGGCGACGTTGGTCATTGGCGTCGCACGG GCCGAACTGTATCCGCGGGTGACATTCGGTGCCGGGCTGGAGTCCTCCGCCAGCAGCCTGGGCACGTTGGGGGACAGTGAGGCGCTGGTGTACTCCGTGG GGCCGTTGCTGTCCTGGCGTTTCCCCAATCGCGGCGTTGCCCTGGCCCAGGTGGGGCAGCGCCGTGCCCAGGCGCGTGAGGCCCAGGCGCATTTCGACGG CACGGTACTGGGTGCCTTGAAACAGGTCGAGCAAGCCCTGGCGCTGTACCAGGGCGAACAGCAGCGCCGCCAGGCCCTGCAAGCCGCGCTGGACAACAGC CAGCAGGCGTTTGAGCTGGCCACCCGCCGTTATCGGGCCGGCGCCCTGGATGCCCTGCAACTGCTGGACAGCGAGCGCAGCCTGGCCAACCTTGAGGCCA CCCTGGCCCGGGCCGACCTGCGCTTGATCAACCGTCAGGTCGACCTGTTCCAGGCCCTCGGTGGCGGCTGGCAACGCGACGATCAACCTCAACCCTTACC CCTTGCCGCGCTTGGAGCCCAGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCAGGCTGTTGAACCCGCCATTCTGCAATCCACTCCCTGCTTGATGCAGCGCCATCGCCGCGCACTGCTGGCGGGAGCATCCCTGGCGACACTGCTGGG GTTGGGGCTGTTTGCCGGGTATTGGTGGCAGTGGGGGCGATTCCTTGAAGAGACCGACGATGCCTATGTGCGCGCCGATTGGGTGGCGGTCAGCCCGCGT ATCGCCGGTTATGTGGCCCAGGTGCTGGTGGAGGACAACCAGCCGGTCAAGGCCGGGGATGTGCTGGTGCGCCTGGATGAGCGGGATTTTATCGAACAGT TGCGCAGCACCCAGGCCCGGTTGCAGCAAGCCCGTGCGGTGGCTAACGCCCGCCAGTCCAGTCTGGATAGCCTCGACGCGCGACTCGATGAGCAGCAACA GCGCATCGCCCAGGCCAGGGCGGCTTTGCATGGCAGCGAGGCGGAGGCCCATCGTGCGCGTCTGGACTTCCTGCGTTACCGCGATCTGGTGGGGCAGCAG
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| Amino Acid Sequence |
>multidrug transporter
MALLLLGALAGCSGLPDEPAAPLTVPAAPQLSRGAATQALPERWWQLYRDPQLDLWVEQALNHNKDLEAAAAHVDALLARLEQVDRERRPSTLLTDGVGY GRRRDDQTLAQATGERADAEWSHTPGFSLSYTLDLWGEVRYRLAAARANADAARALEDEWRVTVAAQTTRAYGQACVYAFSHQVQRHWVQVLQRSVDVTR KLQQAGAATALDLARLNGLLEETRAPLPMLAARHQAALYELAVLSGVPPLEVARQTCSQRLQLQVPLPVGDGWALVQRRADIRRAERQLQAATLVIGVAR AELYPRVTFGAGLESSASSLGTLGDSEALVYSVGPLLSWRFPNRGVALAQVGQRRAQAREAQAHFDGTVLGALKQVEQALALYQGEQQRRQALQAALDNS QQAFELATRRYRAGALDALQLLDSERSLANLEATLARADLRLINRQVDLFQALGGGWQRDDQPQPLPLAALGAQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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