Strain | Pseudomonas deceptionensis strain DSM 26521 7_249332_29.9047, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCGTGCTGCTGACGTGGATCGTGACCAGCCTGCTGACGTTGAAAAACCCGCTGAAAATGTGGGCTGCGCCTGCCCTGGCGATGGGTGTTCTGGTGCTCG CACTGCCTGCGGCCATGCCGACCAGCGTGGTGCACAACAAGATGCCCGACCAGTTCATCCTCGAGCATATGGACGAACTGTCCCAGGCCAAAACCTTTCT GAGCAACGACCTGGGCGCAGCCTCTGCCCTGGCCTGGCGCCTGCGCCGGCCGGACGTGACGCTTTACAACACCCAGGGCGAAGTCAAATACGGCCTGACC TATGACGACGCCAAAGGCAAAAGCATCGGCCTGGCCGATATTGGCCAGTGGATGATTGACGCCCGCCGCCAGGGCTCTGTGGGCGTGGTGATGCGCGTCA AGGACAGCGACGAAAGCCATGAAATGGACGCGTTGCCCAAAGACGCCAAACGCTATGACGAAGGCAACATGGTGATTCTGATTTTCCCGCAGATCGCTCC
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DNA Sequence for Gene |
>TR67_RS21300
ATGACCCTGACACTCCTGCTGCTGGCTTGCCTGCTGACCTGTGCCGGCCAGATCGCCCAGAAATACGCGGTCGAGAGCTGGCGCGGGATCGACACCGGGG TGGCGCAAAAACTGCGTTCGCCCTGGTTGTGGCTGGCACTGCTGTGCCTTGGCCTGGGTTTGCTGGTGTGGTTGCTGGTGTTGCAACGGCTGGAGGTCGG GATTGCTTACCCGATGCTCAGCCTCAATTTTGTACTGATCACCCTGGTGGCCCGCTACCTGTTTAAAGAAGCCATCGACCTGCGCCATTGGTTGGGCGTC GGGTTGGTGATTGCCGGGGTGGTTTTGCTGGGACAACACGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACCTGCGCCGTGGATTTGCCTTTGCCTCAGGCAGCGTGCTGCTGGTCAGCGGTGCCCAACTGGGTATGCGCTGGAGCATGACGCGCTTGCCGCAGCCATC TCAATGGCTGACCGCAATCAGTCAGGGTGATGTATCGCTCATCGCGCTGGGCGTGGTGTTTGGCGCAATCGTCGCCTACGCACTGTCGATGCTGTGCTGG CTGCTGGCCCTGCGCGACTTGCCGCTGGGCCGGGCGTACTCGCTGCTGAGCATCAGCTACGCGCTGGTGTATTTGCTGGCTGCCAGCCTGCCGATTTTCC ATGAAAGCTTCACGCTTTCAAAAACCCTTGGTGTGACCTTGGTCATTCTGGGGGTGCTTACGATCAACTCTCGACGTACCCCAAGTTCCAGGAACTGCGC ATGAAAATCAGTGTAATTGGTAGTGGTTATGTTGGCCTGGTGCAGGCGACGGTACTGGCGGAAGTCGGCCACGATGTGATCTGCATGGACATTGACCAGA
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Amino Acid Sequence |
>4-amino-4-deoxy-L-arabinose-phospho-UDP flippase
MTLTLLLLACLLTCAGQIAQKYAVESWRGIDTGVAQKLRSPWLWLALLCLGLGLLVWLLVLQRLEVGIAYPMLSLNFVLITLVARYLFKEAIDLRHWLGV GLVIAGVVLLGQHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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