Pseudomonas deceptionensis DSM 26521, TR67_RS21195
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas deceptionensis strain DSM 26521 7_249332_29.9047, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGTCGGCCAGCCTGCCGATCCTGATGTTGACAGCCCGCGACGATAGTCATGATCAGGTTCTGGGGCTAGAGATGGGTGCCGACGATTATGTGACAAAA CCTTGCGAGCCCCGTGTATTGCTCGCCCGTGTGCGCACGCTTTTACGCCGCAGCAGCCTGGCCGAGCCCCAGGTGGCCAGTGACCGGATCATGATCGGCA ACCTGTGCATCGACTTGTCTGAACGCACGGTCACCTGGCGCGATCAGGTTATCGAGCTGTCCAGCGGCGAGTACAACCTGCTGGTGGTATTGGCACGGCA TGCCGGTGAAGTGCTGAGCCGTGACCAGATTCTGCAGCGTCTGCGGGGTATCGAGTTCAACGGTACTGACCGTTCGGTGGATGTGGCGATTTCCAAGCTG CGGCGCAAATTCGATGACTGCGCCGGCGAAGCGCGCAAGATCAAGACCGTGTGGGGCAAGGGTTACTTGTTCAGCCGCTCGGAATGGGAATGCTGAACCC
|
|
| DNA Sequence for Gene |
>TR67_RS21195
ATGTTAAAGATTCTGATACGCCTCTACCTGGTGACCATCGTGACGTTTGCCCTGGCCAGTTATCTGGTGCCCGGGGTGATCGTGTCGCTGTTTCATGAGC GTTTCATGAACTACAACGTCGACATGTCGCGGGGTATGCAGACCCTGCTGGTCAAGCAGTTCCATCATCTGCCCACTGAGCAATGGCCAGCCCTTGCCCG CGAACTCGACGCTCAGTTTGAACCGATGCAGGTCAATCTGCTGCCCATTACTGATTCCAAGTTCAGCGCCCAGGAACAGCACCAGTTGCAGCAAGGGAAG GGCGTGTTGCGCATTGGCGATTGGGGCTGGCGCACGCTGGTGGTTTCCCCGCTGGACGAGCAACTTGCCATTGAATGGGTGATGCCTCCGGACCCCTTCG ACATGAGTGTGTTGTATTGGAGTATCAACGTCCTGATTGGCGCTGCATTGCTGGGTGGCTTGCTGCTGTGGCTGCGTCCGCACTGGCGTGACCTGGAGCG CCTCAAGCTCACGGCGGAGCGCATCGGTCAGGGGCAACTGAGCGAGCGTACGCAGATATCCCGCAGCTCCAACATCCACGGCCTGGCCACGGTGTTCGAC ACCATGGCCCAGGACGTGGAAAACCTGCTCAATCAGCAGCGTGATTTGCTTAACGCCGTGTCCCATGAATTGCGTACCCCCTTGACCCGCCTGGACTTTG GCCTGGCGCTGGTGCTGTGCGATGACCTGCCTCAGGACAGCCGCGAGCGCTTGCAGGTGCTGGTGGGGCACATACGTGAGCTGGATGAGCTGGTGCTGGA GCTGTTGTCGTTCAGCCGCCTGCAAAGCCCTTCGCTGGTGCCTGAGCGGGTAGAGGTGTCCCTGGATGAGTTTATCGACAGCATTCTCGGCAGTTTCGAT GAAGAGCTGGAGGCTCCCGAGATCGTGCTGGACGTTCTGCTGCACGGCACCCAGGAACGCTTTGCCCTTGATCCGCGCCTGACTGCGCGAGCGCTGCAGA ACCTGCTGCGCAATGCCATGCGTTACTGCGACCGGCGGATTCAAGTGGGGGTGACCGTCACGGCGCAAGGCTGTGAGTTGTGGGTGGATGACGATGGCAT CGGGATTCCCGAGCAGGAACGCGAAAGGATTTTTGAACCGTTCTATCGTCTGGATCGCAGCCGGGACCGGGCAACCGGGGGGTTTGGTCTGGGGCTAGCG ATCAGTCGGCGAGCCCTGCAAGCCCAGGGCGGCACGCTGAGCGTTGAGCAATCGCCGCTGGGCGGCGCTCGCTTCAAGCTATGGTTGCCGGCTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGCGAGGTGTAGCGGCTTAGATGGAGCGACGTTGTCGGCTCACATGCTTCAAGCCTTCAATGATCAGCACCACGACCGCGAGCCAGATCGGGCCGTAGGT CAGCCATTGACCGTCTTCCAGGCTGTCACCCAGCAACAGGGCGACGGCGACCAGCAGCACGGGCTCAACGTAGCTGAGCAGACCGAACAGGCTGAACGGC AACAGGCGGCTGGCCAGAATGTACGCGAAGCCTGCCGCCGCACTGATGACGCCCATCAGCGGTACCAGCGCATACAAGGCCTGGCGCTGGGCGCCGAGAT CGACATGGGAACCTGCCAGTACAAACCACAGTGCAACCGGAACCATCAACAGCATGTCCAGCCACAGGCCGCCAAGGTTATCGATGCCGATTTTCTTGCG CAGGACGAAGTACATCGGGTAGCCGATAGCCACAACCAATGTGGTCCAGGAGAAACCGCCGGTGCGGTACAGCTCGTTGGCCACGCCGATGACAGCAAGG
|
|
| Amino Acid Sequence |
>histidine kinase
MLKILIRLYLVTIVTFALASYLVPGVIVSLFHERFMNYNVDMSRGMQTLLVKQFHHLPTEQWPALARELDAQFEPMQVNLLPITDSKFSAQEQHQLQQGK GVLRIGDWGWRTLVVSPLDEQLAIEWVMPPDPFDMSVLYWSINVLIGAALLGGLLLWLRPHWRDLERLKLTAERIGQGQLSERTQISRSSNIHGLATVFD TMAQDVENLLNQQRDLLNAVSHELRTPLTRLDFGLALVLCDDLPQDSRERLQVLVGHIRELDELVLELLSFSRLQSPSLVPERVEVSLDEFIDSILGSFD EELEAPEIVLDVLLHGTQERFALDPRLTARALQNLLRNAMRYCDRRIQVGVTVTAQGCELWVDDDGIGIPEQERERIFEPFYRLDRSRDRATGGFGLGLA ISRRALQAQGGTLSVEQSPLGGARFKLWLPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|