Pseudomonas deceptionensis DSM 26521, TR67_RS18380
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas deceptionensis strain DSM 26521 5_438339_49.8392, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCGCGACCTTCGCCCTTCTTGAGCAAAGTGCCGACCCGCTCTTTCATCTCGCGAGCGGCCTTGTTGGTAAAGGTCATGGCGACGATGTACTGGGCACG GATGCCACAGTTCTGGATCAGGTGCGCGATTTTGCGGGTAATCACGCTGGTTTTGCCGGAGCCCGCGCCGGCGAGCACCAAAAGAGGGCCGCCGACGTAG CTCACGGCTTCTTGCTGCCGGGGATTGAGTCGGGACATGACGAGATTAGGGGTCGTTTATAAAAAGGGCGGGCATTTTAACAGGATGAGCAGATATTGCT GCCTCTGTGCGACGGTGTGACACGACACATCATCTAAATTTGCCGCTTTTGTCAGTTTCGCGCAGGATGCAAAGCGTATTGGCGGCTACCGTAAGGTTAA CGCTGTAAATAGGTATTTGATAATCAATGTCATTTGCCATTGGTTGTTTGCACGGCATAATGCCCATCGCCTGATTTTTTGCAGAGTCTAGGGAGCTAGC
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| DNA Sequence for Gene |
>TR67_RS18380
TTGTCTACGCCTGTCGAACCCTTGCGTTTGCTGCTACTGGCCGAAGAGCCATCTTGGGCAGCGTTATTGCGCGAGTGTCTGAGGCCTATGGGAAGCACGG CCGTCATCATTGGCGCGCCAAGCTGGGAGTCTGTCAGCCATCTGTTCGAGAACGATCGAAATGCGCTGCTCCTGACCACCCCGGCCCTGCAGCCTTGCGC AGGCCGCTGTCGCCTGCCCACTGTTTTGTTGCTCGACACCGAGCCAGCAACCGCGCCCCAGGGTGTCAGCGACTGGCTGGTCAGCAGCACCCTGACTTCC GACGTGCTGCGTCGCTGCCTGCGCCATGTGCGCGAACGCGGCGTGCTGGAAAACACGCTGCTGCGCCTGGCCGAAGAAGACCCGCTGACCGGCATCGCCA ACCGCCAGGGCTTCCAGACCCTGCTGGCCGTGCGCCTGGCCGAAAGTGACGGCCGCGGCATCGCTCTCGGGCACCTGGACCTGGACAACTTTCGACACGC CAACGACGCGCTGGGCCACCAGGCCGGCGACCGTCTGATCCTGCATGTGGTGGCGCGCCTCAAAAGCCAGCTTGAAGCCGGCGACCAGCTGGCCCGGCTG GGCAGCGACGAGTTCGCCCTCCTGATCAACACCCATCGCGCCCCGGAACGGGCCGAATGGATGGCCGAGCGCATTACCGAGGTCATGGCAGAGCCCTACT GGGTCGATGGCGAAAGCCTGCTGATCGGCTGCAGCCTGGGCATCGCCCATGCACGGGCCAGCGCCGGGGCCGACCCGTTGATGTGGCACGCACATATCGC CATGCAACAGGCCAAAAGCACCCAGGGCTGTACCTTTCACGTGTTTAACGAGCGCATCAATCGCAATGCCCGCAGCCTGGCCGACCTCGAAAGCGAGCTG CGACGGGCCCTGCGTCGTGACGAGCTGGAGCTGCATTACCAGCCGCGCCTGGACCTGGGCACGGGCCAGATTGTCGGGCTCGAGGCGCTGGTTCGCTGGC GTCACACCGAGCGCGGCTTGCTCGCACCCAGCGAGTTCGTGCCGCTGGCCGAGCAAAGCGGGCTGATCGTGCCGCTGGGTTACTGGGTCATTTCCAGGGC CTTGCGCGATATGCAGGCACTGCGCGAACGCGGGCTGGAACCGTTGCATATGGCGGTCAACCTGTCTTTCCGCCAGTTCCAGGACAGCCAGTTGCTGTCG ACCCTCAGCCGCCTGATTACCGAACGGGGGGTTGAGGCGCAGTGGCTGGAGTTCGAACTGACCGAAACGGCCGTCATGCGACGCAGTGATCTGGTCAAGC AAACAATGGATGCCCTGGGCCGACTCGGGGTGCGCTTTTCGCTGGATGACTTCGGCACCGGCTTTTCATCGTTTGTGCACCTCAACAGCCTGCCGATTGC GCTGCTCAAGATCGATAAAAGCTTCGTGGGGGGCATGGAAAGCCGCGAAGAAAATCGCAAGCTGGTCCACGCCATGATCAACCTTGCCCACAACCTCAAC CTGGAAGTGGTCGCCGAGGGTGTCGAAACCCCCGAGCAGCTTGCTCTTTTGAGGGGGTTTGGCTGCGACCAGGTGCAGGGTTACTTCATCAGCAAACCGC TGCCGCTGGCAGAGCTGGTGGAGTATTTAACCTTTGGGGCTCAGCAAAAGGTGATGCCGCAGGCAATCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCTGCGGCGACAGGTCGTGCGTCACGCCGCCTCTAACCCCGCCGTTTTCGCCGCCTTGCGCTCGCGCTTGAGCATGCGCCGCACTTTCCATTCGAATGC CAGGCTCAGGCTGATCGCCGCACAGGCCAGGCCCATTGCCAGACCCCACCAGACACCGGCCGGGCCCCAGCCGAAAGTAAAGGCCAGCATCCAGGCCATC GGTGCGCCAATCGCCCAGTAGCAAAACAGCCCGACCAGAAAGGTGGTCTTGGCATCCTTGAGCCCGCGAATCGCCCCCATGGCGATGGTTTGCGCGCCAT CGAACAGCTCAAACCATGCAGCCACCGCCAGCAGGCTGACCGCCAGCTCAAACACCGGGCGGAAAGCGGGGTCGTTGTAATCCAGAAACAAGCCCACCAG TTCCTTTGGCCAGAACCAGAACACCACCGAAAACCCGAGCATCACCACGGCGCCGGCACCGATGCCGACCCGGCCGGCCAACCGCGCCCGCTGCAAGTCA
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| Amino Acid Sequence |
>diguanylate cyclase
MSTPVEPLRLLLLAEEPSWAALLRECLRPMGSTAVIIGAPSWESVSHLFENDRNALLLTTPALQPCAGRCRLPTVLLLDTEPATAPQGVSDWLVSSTLTS DVLRRCLRHVRERGVLENTLLRLAEEDPLTGIANRQGFQTLLAVRLAESDGRGIALGHLDLDNFRHANDALGHQAGDRLILHVVARLKSQLEAGDQLARL GSDEFALLINTHRAPERAEWMAERITEVMAEPYWVDGESLLIGCSLGIAHARASAGADPLMWHAHIAMQQAKSTQGCTFHVFNERINRNARSLADLESEL RRALRRDELELHYQPRLDLGTGQIVGLEALVRWRHTERGLLAPSEFVPLAEQSGLIVPLGYWVISRALRDMQALRERGLEPLHMAVNLSFRQFQDSQLLS TLSRLITERGVEAQWLEFELTETAVMRRSDLVKQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPIALLKIDKSFVGGMESREENRKLVHAMINLAHNLN LEVVAEGVETPEQLALLRGFGCDQVQGYFISKPLPLAELVEYLTFGAQQKVMPQAI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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