Pseudomonas deceptionensis DSM 26521, TR67_RS18210
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas deceptionensis strain DSM 26521 5_438339_49.8392, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGGTTAAAGAGCGCTTCCCAAAACCCCTGTAAGGGCTTTACATTGGCGCTTACAGAGGTTTTTGGGGCAACGCCCGAAAAATCAGCGCTTCCCTAATGG CTGGTGATTTTTTAAACTGTTTAGTCCGCTCGCCCATCCGGGCAGCGCGCATATTGCATTTGCTACGAGGAAGACCATGGCCCGCGTAACCGTTGAAGAC TGTCTAGAACACGTGGATAACCGTTTTGAGCTGGTCATGCTCTCTACCAAGCGTGCCCGTCAACTGGCCACCGGCGGTAAAGAGCCACTGGTTGAGTGGG AAAACGACAAGCCGACCGTTGTTGCCTTGCGTGAAATCGCTGCAGGCCTGATGAGCTACGAGTTTATCGCTAACGCTGAAATCGTCGAAGACGAACCGCT GTTCGCAGCGTTCGAGGACGAGTCCAACGAGGCGAACTAAGCCTATGCCCGGTCGACATAGCACGGCGAAGGGTAAAAAGTTTTGGCAGGAGGTTTCCTC
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| DNA Sequence for Gene |
>TR67_RS18210
ATGCCGAGCATAGACGCCCTCGCCGATCGCTTGTCGGCGTACCTCGGCCCGGACCAGGTCAATCTGGTCCGCCGGGCGTACTTCTACGCAGAACAAGCCC ACGACGGCCAACGCCGACGTAGCGGCGAGCCTTATGTCACGCATCCGCTGGCAGTGGCAAACATCCTTGCCGATATGCATATGGACCATCAAAGCCTGAT GGCGGCCATGCTGCATGACGTAATCGAAGACACCGGTATTGCCAAGGAAGCGCTAGTCGCGCAGTTCGGCGAAACCGTGGCCGATCTGGTCGACGGGGTC AGCAAGCTGACTCAGATGAACTTCGAAACAAAGGCCGAAGCCCAAGCTGAAAACTTCCAGAAAATGGCCATGGCCATGGCGCGTGATATTCGCGTGATTC TGGTGAAGCTGGCTGACCGGCTGCACAACATGCGTACCCTCGAAGTGCTGTCCGGCGAAAAACGCCGACGGATTGCCAAGGAAACCCTGGAAATCTATGC ACCCATTGCCAATCGGCTGGGTATGCACAGCATTCGTATCGAATTCGAAGACCTCGGTTTCAAGGCGATGTACCCGATGCGCTCCGCGCGCATTTATCAG GCCGTCAAACGCGCCCGGGGCAATCGCAAAGAGATCGTGAATAAAATTGAAGAATCGCTCAGCCACTGTCTGGCCATTGATGGCATTCAGGGCGAAGTCA GCGGTCGTCAAAAGCATATCTACGGTATCTACAAAAAAATGCGCGGCAAGCGCCGGGCCTTCAACGAGATCATGGACGTTTACGCGTTCCGGATCATCGT CGACAAGGTCGATACCTGCTACCGCGTGCTGGGTGCTGTACATAATTTGTACAAACCCCTGCCGGGGCGTTTCAAGGATTACATCGCCATTCCCAAGGCC AACGGCTATCAGTCGTTGCATACCACCCTGTTTGGCATGCATGGCGTACCGATCGAAATTCAGATCCGTACCCGTGAGATGGAAGAAATGGCCAACAACG GTATCGCCGCCCACTGGCTGTACAAATCCAGTGGCGACGAGCAGCACACGGGTACACACGCCCGGGCGCGGCAGTGGGTCAAGGGCGTGCTGGAGATGCA GCAGCGCGCAGGCAACTCCCTCGAATTTATCGAAAGCGTGAAAATCGACCTGTTCCCGGACGAGGTCTACGTCTTCACGCCCAAAGGCCGGATCATGGAG CTGCCCAAAGGCTCCACGGCAGTCGACTTCGCCTACGCGGTGCACACCGACGTGGGCAACAGCTGTATTGCGTGCCGGATCAATCGCCGGCTCGCGCCGT TGTCCGAGCCGCTGCAAAGTGGCTCCACGGTCGAGATCGTCAGTGCGCCCGGCGCGCGTCCCAACCCGGCCTGGCTCAACTTTGTGGTCACCGGCAAGGC GCGCACGCATATCCGTCATGCGCTCAAGCTGCAGCGTCGCTCCGAGTCGGTCAATCTGGGCGAGCGCCTGCTGAACAAGGTGCTCAACGGCTTCAACAGT GCGCTGGATAAAATCCCGGCCGAGCGCGTCCAGGCAATGCTTCAGGAGTATCGTCTGGAGCAGATCGAAGACCTGCTCGAAGACATCGGCCTGGGCAATC GCATGGCCTACGTGGTGGCCCGACGTCTGTTGGGTGAAGGCGAGGCACTGCCGAGCCCGGAAGGTCCGCTGGCGATTCGCGGTACGGAAGGTTTGGTGCT CAGTTACGCCAAATGCTGTACGCCGATCCCGGGAGATCCGATTGTTGGTCATCTGTCCGCGGGCAAAGGCATGGTTGTGCACCTGGACAACTGCCGCAAT ATCAGTGAAATCCGCCATAACCCCGAAAAATGCATCCAGCTTTCGTGGGCCAAGGACGTTACCGGCGAATTCAACGTCGAGTTGCGCGTCGAGCTGGAAC ATCAGCGCGGCCTGATTGCGCTGCTGGCCAGCAGCGTAAACGCCGCCGACGGCAACATCGAAAAGATCAGCATGGACGAACGCGATGGTCGAATCAGCGT CGTTCAACTGGTGGTCAGCGTGCACGACCGCGTGCACCTGGCTCGCGTGATCAAAAAACTGCGCGCCCTTACCGGGGTTATCCGCATCACTCGTATGCGT GCGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCATCTAATTACAAGGAGTCACCCATGTCCAAGACTGTTATCACCAGCGACAAGGCACCTGCTGCAATCGGTACTTATTCTCAGGCGATCAAAGCTGGCA ATACTGTCTACATGTCCGGTCAAATCCCGCTGGACCCAAAAACCATGGAGCTGGTTGAAGGCTTTGAAGCCCAGACCGTTCAGGTTTTCGAAAATCTGAA GTCGGTGGCCGAAGCCGCGGGTGGTTCGTTCAAGGACATCGTCAAGCTGAACATCTTCCTGACAGACCTGAGCCACTTCGCCAAGGTCAACGAGATCATG GGCAAGTACTTCGAGCAGCCATACCCGGCCCGCGCCGCCATCGGCGTTGCAGCCCTGCCAAAGGGTTCGCAGGTAGAGATGGACGCTATTCTGGTACTTG AGTAACACCCTCGGCGCAGCGTCTTCATGCTGCGCCAACCCCCGCTCCTCCTTGTTTCAAAAGGACCCCGCCATGCGCAAAGCGCTCGTGTTGTCACTGC
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| Amino Acid Sequence |
>bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
MPSIDALADRLSAYLGPDQVNLVRRAYFYAEQAHDGQRRRSGEPYVTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALVAQFGETVADLVDGV SKLTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAPIANRLGMHSIRIEFEDLGFKAMYPMRSARIYQ AVKRARGNRKEIVNKIEESLSHCLAIDGIQGEVSGRQKHIYGIYKKMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDYIAIPKA NGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSSGDEQHTGTHARARQWVKGVLEMQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIME LPKGSTAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLNFVVTGKARTHIRHALKLQRRSESVNLGERLLNKVLNGFNS ALDKIPAERVQAMLQEYRLEQIEDLLEDIGLGNRMAYVVARRLLGEGEALPSPEGPLAIRGTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLDNCRN ISEIRHNPEKCIQLSWAKDVTGEFNVELRVELEHQRGLIALLASSVNAADGNIEKISMDERDGRISVVQLVVSVHDRVHLARVIKKLRALTGVIRITRMR A
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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