Pseudomonas deceptionensis DSM 26521, TR67_RS16285
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas deceptionensis strain DSM 26521 4_458233_34.2329, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACTGCGCTCGCAGGAGCTCAACCTGCGCTTCCCGGGCTTGCTGGATTGCATCCTCTCGCAAGCCTGAGTGGCTGGCGCTGTCTCATCAGCCGCCCGTTGT TTCTCGCCTTCTCGCCTTCTCGTGTTTTGTAGCTAACCTTCTCGAAAAAACCACATCTTGCTCTGCAAAAGTCAGGAGGCCGGCTGTCTGCTGTCGATCA GCATAGCGTCGTGTGCCGACTCTCCATTGTGTCCGATCCGGGCAAGCCAAAACCCATATTCCGGAGCGGGCTCCTATCGACCTGGTTCGAGTCAGCGACT TAACAAAGCTTCACATTTGAACAGCAGGGAAATGGGTGGGCTTCGGTTAGCATCGCGGCCCAGCCCTGAGCCGCAAGCAGGGCAAAAACGGCTTTGGGGA TGTTGTGCGACCTCAAAGGCTGACCATTAAAGTGCTGTAATCCAGATAAAAAGGCTTATCTATTTTGTCCAGTGGTCATGCGAACCGTTGGTGGGTCCTG
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| DNA Sequence for Gene |
>TR67_RS16285
ATGTCGGTCATTCTGGCTTTTATGCCGATTGTCCTGGATTACACCATTCTTCATGTCGCGGTTCCGTCACTCACCCTTGCGCTGCAAGCAACGGGTACCG AGATTCTGTGGATCATCGACATATACCCTTTGTTGATGGCCAGCCTGCTGATCCCCATGGGCACGCTTGCGGACAGAGTTGGCCATCGCCGAATGCTGCT GGCTGGTTTGGGTATCTTCTGCGCCGGTTCTGTATTGGCCGCCTTTTCTCCCAATGTTGGAGCGTTGATCGGGGCAAGGGCGTTCATGGCATTCGGCGGC GCCATGGTCATGCCCAGCGTCCTTGCGATTATTCGACAAACTTTTGAAGATGAGGGCGATCAAGCGGTAGCGCTGGGTATCTGGGGCGCTGTTGCCTCCA CCGGTGCCGCCATCGGGCCCTTGGTGGGTGGAGCACTGCTTGAGCATTTCTGGTGGGGAGCGGTCTTCCTGGTTAACGTGCCTGTGATGCTCCTGGTCAT ACCGTTAGTCATTGCCTACATACCGCGACGCAGTGTGGTCGGCGATGGAAACTGGACCATCGGACAGTCCGTGATTCTGATTCTGGGCGTCATGGCAACT GTTTACGCCCTCAAATCGGGCTTTAAGACCGACAGCTCCCTTATCGAAACCGGTGCATGCTTTTTATTCGGTGCACTGATGCTTGTCTGGTTTGTGCGCA AACAGCTTCACACCTCTACCCCAATGCTTGATCTAAGCCTTTTTTCCATTCCGGCGGTCAGCACGGGTGTCGCCATGGCTGTCGTCACAATGGGAGCGCT TGCCGGGTTCGAATTGTTGCTGGCTCAAGAACTGCAGTTCGTCATGGGCCGTACACCCCTGGAGGCCGGTATTTTCATGATGCCGCTAATGATTGCGGCT GCAATCGGTGGGCCTCTGGCAGGCGTCATCCTTCGGGCAATTGGGCTCAGGTGGGTGGCGAGCTGCTCATTGTTGGTGTCCGCTGCAAGTCTGCTCGGGT TGGCCCATTTACACTTGGGCAGCGGCGGGGTAGCCGTTGTTGTGATGCTGGTGGCTTTGGGGCTCTCGCTCAGCATTGGTTTAACCGCATCGTCGGTGGC GATCATGAACAGTATTCCAATAGAGAAGGCTGGCTCTGCCGGAGCCCTTGAAGCCACGAGTTACGATCTTGGTACCGGATTGGGTATATCCGTCTTCGGT GTTCTTCTCGTATCCACCTATGAAAAATCAATACGCCTGCCTGACGGCATTCCAACAGCAATTGCCGAGACAGCCGTCCGGTCTATTGGTGAAACGCTGG TGGCCGCAAACAGTCTTGGAGGCATCCAGGGGCAGCAGCTCGTTGCAGCGGGGCAAAAGGCTTTTAGTGCCTCTCACAGCGTAGTTTTACTGACAGCGGC TGCACTCGTCGGCGCATTGAGCCTATTGGTCTGGTTTGTGTTGAGGCATCACAAACGCAGGTCGGGTGATTCGGGTGCCGTCAGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAAAGCACGCGCAAGCGCTTCGAGCGCACCCTGGAAGAGAAGCATTTTAAAGTCGTCAGGCTCACCGCCTTCTTGCCGCAGGGCTGGCGGATGCACAGCC CGCTCTCACAGGTTTTGCCGGTGGTTTCTCCAGGATTTGCTATGCTCGCGCCCTCGACCGCAAGCGCCAACATAGGCGTGTCCAGTTCACATTGAGCCTA TTTATGTCTGCTGATACTCAAGCCACACCGGTGCGCTTTTCCCGTTCCGACTACAGAACCCTGGGCCTTGCAGCCCTGGGCGGGGCGCTGGAAATCTACG ATTTCATCATTTTTGTGTTCTTTGCCCTGATCCTCAGTCAGCTGTTTTTCCCGCCGGACATGCCCGAGTGGTTGCGTCTGCTGCAAAGCTTCGGGATTTT CGTGACCGGCTATCTGGCGCGACCGCTGGGCGGGATCCTGATGGCGCACTTTGCTGACCATCTGGGGCGCAAGCGGGTGTTCAGCCTGAGCATCCTGATG
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| Amino Acid Sequence |
>methyl viologen resistance protein SmvA
MSVILAFMPIVLDYTILHVAVPSLTLALQATGTEILWIIDIYPLLMASLLIPMGTLADRVGHRRMLLAGLGIFCAGSVLAAFSPNVGALIGARAFMAFGG AMVMPSVLAIIRQTFEDEGDQAVALGIWGAVASTGAAIGPLVGGALLEHFWWGAVFLVNVPVMLLVIPLVIAYIPRRSVVGDGNWTIGQSVILILGVMAT VYALKSGFKTDSSLIETGACFLFGALMLVWFVRKQLHTSTPMLDLSLFSIPAVSTGVAMAVVTMGALAGFELLLAQELQFVMGRTPLEAGIFMMPLMIAA AIGGPLAGVILRAIGLRWVASCSLLVSAASLLGLAHLHLGSGGVAVVVMLVALGLSLSIGLTASSVAIMNSIPIEKAGSAGALEATSYDLGTGLGISVFG VLLVSTYEKSIRLPDGIPTAIAETAVRSIGETLVAANSLGGIQGQQLVAAGQKAFSASHSVVLLTAAALVGALSLLVWFVLRHHKRRSGDSGAVS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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