Pseudomonas deceptionensis DSM 26521, TR67_RS15010 (fliN)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas deceptionensis strain DSM 26521 4_458233_34.2329, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGTCAACTTCGAGTACATCAACTCGGAAGTGAACCCGGCCATGGCCAACATCGTAGGCCCCAGCGAAGCCGTTGTGGTGTCCACCTTTCACATCGAAC TCGACGGCGGTGGCGGCGACCTGCACGTGACCATGCCGTACTCGATGATCGAGCCGGTGCGCGAAATGCTCGACGCCGGTTTCCAGTCCGACCTCGACGA TCAGGACGAGCGCTGGAGCAAGGCCCTGCGCGAAGACGTGCTCGACGTCAGCGTGCCGATCAGTGCCACGGTGGCCCGTCGCCAATTGCGCCTGCGGGAC ATCTTGCACATGCAACCCGGTGACGTGATCCCGATCGAGCTGGAAGACGAATTGGTGATGCGCGCCAATGGCGTGCCCTCGTTCAAGGTCAAGCTGGGCT CCCACAAGGGCAATCTGGCCTTGCAGGTTGTTGAACCCATCGGTCGGCGTTAAGCCGCTCCACACGAATCCAATGATTGATTGCCCGCCGAGGACACCCC
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| DNA Sequence for Gene |
>TR67_RS15010
|fliN
ATGGCTAACGAACACGATACAACTGCTGCAGACCAGGCGCTGGCTGATGAATGGGCCGCCGCGCTGGAAGAAACCGGCGATGTTGGCCAGGCAGATATCG ACGCGTTGCTGGCTGCCGATGCGGCGACCAAACCGACCTCCAACCGTCTGGCGATGGAAGAGTTCGGCAGCGTTGCGCGCAATAACCAGCCGGTCACGCT CGATGGTCCCAATCTGGACGTGATTCTGGATATTCCGGTGTCGATTTCCATGGAAGTGGGCAGCACCGACATCAACATCCGTAACCTGCTGCAACTCAAC CAGGGTTCGGTGATCGAGCTTGACCGCCTGGCCGGAGAACCGCTGGACGTGCTGGTAAACGGCACCCTGATCGCTCACGGCGAAGTGGTGGTGGTCAACG AAAAGTTCGGCATCCGCCTGACTGACGTGATCAGCCCAAGCGAACGCATCAAGAAGCTGCGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGAAGCGGGTTCTCGGCGGTTTACTCGCGTTCCCCGTCACCGTGCTGGCGGCTGAGCCGTTGGCCAGCGCCACGACGGTTGCTGCGCCCGTTGTCGGCA GCAGCATCGGCGGGCAATTGACGCAGCTGGTGCTGGGCTTGCTGCTGGTGCTGGGGCTGATTTTTGCCCTGGCCTGGCTGCTGCGCCGAGTGCAACAGAC CGGGCCGCGCCAGGGGCAGGTGATCGAACTGATCAGCTCCCGGGCCTTGGGCGCGCGTGATCGGCTGGTGCTGGTGCAGGTCGGCAACGAGCAGATCCTG CTCGGCCTTACACCGGGCCGTATCACCCCGCTGCACGTGCTCAAGGAACCGGTGCAAGTGCCAGGTACTTCACAGCCGGCAACCCCTGAATTTGCCAAGC GGCTGATGGAAATACTGGGTCAGCAAAAGGACAAGCCGTAATGCGTTTAGTTGTCGCGCTGTTGTTGGCGCTGGTCGCGCCATTGGCGTTAGGGGCTGAC
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| Amino Acid Sequence |
>flagellar motor switch protein
MANEHDTTAADQALADEWAAALEETGDVGQADIDALLAADAATKPTSNRLAMEEFGSVARNNQPVTLDGPNLDVILDIPVSISMEVGSTDINIRNLLQLN QGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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