Pseudomonas deceptionensis DSM 26521, TR67_RS13935
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas deceptionensis strain DSM 26521 3_551948_49.6358, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGGCATTTTCGTATTGAGCAGCCGACACACCGACCGTCACCGGCTCAAAGCGTGCAATGGCCTTGGCCACCGCGGCGTGCGCCGCCTGGGCAGGCTTGC CGCCCAGACGCCAGTTGTCCGGACGCTCTGGCCAGATCATCCAGGTCTGGGTCTGCGGAGCCCATTCAGCCGGCATGTAAAAGCCGTCAGCGCGTGGCGA ACTGTGCAAAGTGGTCATCTGGACTCCTGGAAAGCATCGGGATTTGGATTCGTATAGTAAGAAGACAGTGAACGCTGGCCTGTATCACGTCAACAACGAG CGTCTTTATAGCCGATATATATCTGCAATTAAATTAAATTTTCGAATGTCATGCTGATATAAACCACAAAACACGGATATAAATCCGTCTTTACACCTGT CTCCGTATTTTCCTGACCTCCCACACTTGCACCCTCCCGTACATCCCCACAAGCTATGCGCCAGTCGATTAAAGCCCTCCAGGGAACAAGGAAAATCTCC
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| DNA Sequence for Gene |
>TR67_RS13935
ATGCGCATTTTAGTCACCGGCGGCGCCGGTTTTATTGGTTCAGCGTTGATCCGTCACCTGATCAAAAATACCGGGCATGAAGTCCTCAACCTCGACAAGT TGACCTACGCCGGTAACCTGGAGTCGCTGCAAAGCATCGCCACCGATACCCGTTACGAGTTCGTCCAGGCCGATATCGTCGACCAGGCCGCCGTCAGCGC CGTTATTGCGCGCTTCCAGCCCCAGGCCATCATGCACCTGGCAGCCGAGTCCCACGTAGACCGCTCCATCGACGGCCCGTCGGATTTTATCCAGACCAAC ATCGTGGGCACCTACAGCCTGCTCGAAGCCACCCGCGCTTACTGGCTGACCCTGCCTGAGCCGGAAAAAAGCGCGTTCCGCTTCCACCATATTTCGACCG ATGAAGTGTATGGCGACCTGCACGGCGTCGACGACCTGTTCACCGAAACCACGCCTTACGCACCAAGCTCGCCGTACTCGGCCAGCAAGGCGGCGTCCGA CCACCTGGTACGCGCCTGGAACCGCACTTACGGTTTGCCGGTGTTGCTGACCAACTGCTCGAACAACTACGGGCCGTTCCACTTCCCGGAAAAACTGATT CCGCTGGTAATTCTCAACGCCCTGGCCGGTAAGCCGCTGCCGGTGTATGGCAATGGCCTGCAAGTGCGTGACTGGCTGTTCGTCGAAGATCACGCCCGTG CCCTGCTTAAAGTCGTGACCGAAGGCACGGTGGGCGAGACTTACAACATCGGCGGGCACAACGAACAAACCAACATCGATGTGGTGCGCAGCATCTGCAC ACTGCTTGAAGAACTTGCACCCGCACACCCGGCCGGCGTCGACCAATTTGCCGACCTGATTACCTTCGTCAAGGACCGCCCGGGGCACGACCAGCGCTAC GCCATCGACGCCAGCAAAATCGAGCGCGAGCTGGGCTGGGTACCCGAAGAAACATTCGAAACAGGCCTGCGCAAAACCGTGCAGTGGTACCTGGACAACC TGGAGTGGTGTCGCCGGGTTCAAGACGGCAGCTATCAAGGCGAACGACTGGGCTCCACCGAACCCAAGGACTTGATCGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATGACCTTAAAGCCCCTTTGAAAATCCTGATCAGCGGCAAAACCGGCCAGGTTGCGGTTGAGCTGCAAAAGCACCTTGCCGGTCTGGGCGAGCTGATAGT GCTGGGACGTGACCAGCTGGACCTGAGCCAGCCCGAGAAAATCCGGGCCCGGGTGCGGGCACACAAGCCCGACCTGATCATCAATGCCGCAGCCCATACC GCTGTGGATCAGGCTGAAAACGAACCTGAGCTGGCATTCGCGATCAATGGCACCTCACCAGGCGTGCTGGCTGAAGAAGCCGCAGCCCTGGGCATTCCAC TGATCCACTACTCCACCGACTACGTATTCGATGGCAGCAAGTCGGCGCCCTACACCGAAGACGATGTCCCCAACCCGCTGGGCGTCTACGGCAAGAGCAA GCTGGCGGGTGAACTGGCCATCGCGGCGAGCGGTGCTCAGCATTTGATCCTGCGCACCAGCTGGGTGTACTCGACCCACGGCAAGAACTTCCTGCTGACC
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| Amino Acid Sequence |
>dTDP-glucose 4,6-dehydratase
MRILVTGGAGFIGSALIRHLIKNTGHEVLNLDKLTYAGNLESLQSIATDTRYEFVQADIVDQAAVSAVIARFQPQAIMHLAAESHVDRSIDGPSDFIQTN IVGTYSLLEATRAYWLTLPEPEKSAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWNRTYGLPVLLTNCSNNYGPFHFPEKLI PLVILNALAGKPLPVYGNGLQVRDWLFVEDHARALLKVVTEGTVGETYNIGGHNEQTNIDVVRSICTLLEELAPAHPAGVDQFADLITFVKDRPGHDQRY AIDASKIERELGWVPEETFETGLRKTVQWYLDNLEWCRRVQDGSYQGERLGSTEPKDLIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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