Pseudomonas deceptionensis DSM 26521, TR67_RS13785
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas deceptionensis strain DSM 26521 3_551948_49.6358, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGTACTGCTCAATGCCAACCTGGAACAGCAACTGTGCAAGGGCATCTCCACCCTCAATCGTAAAACCCTGAGCGGCGCCCCGCTGGCCAAAGACACTC CGTTCAAGGAGCTCAAGGGCAGCCTGGTGTTCCGCAACGGCGTAGCCAGCAATCCGGACATGATCGTGCGCATGCCTGGCCTGAGCGTAAAAGGTGATGG CGACATCGACCTGCGCGTACTGGGCATGGACTACCGCATCGGCATCGTCGTCGAAGGCGACACCCGTGCCATGCCGGACCCGGCGTGCCAGGTCGGCAAG AACTTTGTCGGCGTCGAACTGCCATTGCGCTGCCGTGGCCCGCTTGAACTGGGTGCCAAGGCCTGCCGTCTGGACAAGGAAGGGCTGGGCAAAGTCGCCG CCAAGGTGGCAGGCAACAAGCTCAGTGACAAACTTGAAGAAAAACTGGGCGACAAGGTCAGCCCGGAACTCAAAAACGCCCTCAAGGGGCTGTTCAACCG
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| DNA Sequence for Gene |
>TR67_RS13785
ATGAGAGACGAGCAATTTTCAGCGGCGGTCCTCAATTGGTATGACCGCCACGGCCGCCATGACCTGCCCTGGCAACAGGGCATCACCCCGTACCGGGTGT GGGTCTCGGAAATCATGCTGCAGCAAACCCAGGTCAGCACCGTGCTGAACTACTTCGACCGGTTCATGGCATCCCTGCCAACGGTCGAAGCCCTGGCCGC CGCACCGGAAGACGAAGTGCTGCACCTGTGGACAGGCCTTGGCTACTACACCCGCGCGCGCAATTTGCAGAAGACCGCGAAGATCGTCGTTGCCGAACAT GGCGGCGAATTCCCGCGCAATGTAGAACAGCTGGTCGAGCTGCCCGGCATCGGTTTATCCACCGCAGGTGCGATTGCCAGCCTGAGCATGGGCCTGCGTG CACCAATCCTGGACGGCAACGTCAAACGGGTGCTGGCACGCTACACCGCGCAAGAGGGCTACCCCGGCGAGCCCAAGGTTGCCAAAGAACTGTGGGCCAC CGCAGAGCGCTTCACCCCCCACGACCGCGTCAACGCCTACACCCAGGCGATGATGGACATGGGCGCCACGCTCTGCACCCGAAGCAAGCCCAGCTGCCTG CTGTGCCCGCTCGAAAGCGGCTGCGAAGCGCACCTGCTGGGCCTTGAGACGCGCTACCCGATCCCCAAGCCGCGCAAGACCATCCCGCAAAGGCGCACGC TGATGCCAATGCTGGCCAATGCCGACGGTGCGATCCTGCTTTACCGCCGCCCGTCGACCGGTTTGTGGGGCGGACTGTGGAGCCTGCCCGAACTCGATGA CCTCAAAGACATCGAGCACCTGGCGCTGCAACACTCACTGACCCTGGGCGCGCAGCACGAACTGGGCGGCCTGACTCACACCTTTAGCCACTTCCAACTG GCCATCGAACCCTGGCTGATCCACGTCAAGGAGTCCGGCCATCACGTGGCCGAGGCCGACTGGCTCTGGTATAACCTCGCCACCCCGCCGCGCCTGGGCC TTGCTGCCCCGGTCAAGAAGCTGCTCAAACGCGCAGCCGACCTATTGAACGCTGGAGAGTCGTCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGCACCATCATCTGCCGCAAGTACAAAGAAGAATTGCCCGCCCTTGAGCGCGCTCCGTTTCCGGGCGCCAAAGGTCAGGACATTTTTGATCACGTTTC GGCCAAAGCCTGGGCCGACTGGCAAAAACACCAGACCTTGCTGATCAACGAGAAGCGTTTGAACATGATGAACGCCGAAGATCGAAAATATTTGCAGGGC GAAATGGATAAATTCTTCAGCGGCGAAGAATACGCACAAGCTGAAGGCTACGTTCCGCCAACCGAATAAATCCCGGTTTTAAAGGCTTTGGTCCGTAAGC GACGGTAATAACTAAATATTTTTCAAAAAAGTGTTTGACGGGTCATCGAAAAAGGCTTCTAATGCGCCCCGTTGCCCAGATAGCTCAGTCGGTAGAGCAG GGGATTGAAAATCCCCGTGTCGGCGGTTCGATTCCGTCTCTGGGCACCACATTCAGCTTTGATGTGGTGCAAACATCACCTCAAAGCAAAGAAAAACCCG
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| Amino Acid Sequence |
>adenine glycosylase
MRDEQFSAAVLNWYDRHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMASLPTVEALAAAPEDEVLHLWTGLGYYTRARNLQKTAKIVVAEH GGEFPRNVEQLVELPGIGLSTAGAIASLSMGLRAPILDGNVKRVLARYTAQEGYPGEPKVAKELWATAERFTPHDRVNAYTQAMMDMGATLCTRSKPSCL LCPLESGCEAHLLGLETRYPIPKPRKTIPQRRTLMPMLANADGAILLYRRPSTGLWGGLWSLPELDDLKDIEHLALQHSLTLGAQHELGGLTHTFSHFQL AIEPWLIHVKESGHHVAEADWLWYNLATPPRLGLAAPVKKLLKRAADLLNAGESS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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