Strain | Pseudomonas deceptionensis strain DSM 26521 2_755170_40.3237, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCTATTAGACACCTCGCAAGCCATGCGAGCACCTCAATAGCGCTCCATTTGCAGCTAGAGTAAAAAAGCCGCTATTCAAATCCTGGTGATTGGCTTATC CTTTTCGCTGTATATAAATACAGTAATCGTTAGATAATTTACGTGAAGGCATATGAGGTGGTAAATGGCCGTCGAAGTGGTATACCGCAGCAGCCGAGAT CTGGAGCGTTTGTTCATGGATAAAGCCGAAGCTGACCGTCATGACAAAATGCTGGAGCTGGCCGAATTGCTGGCTGAAGTGTTGCAAAAAGCTGTGCCGT CACTGAGCGAACAGCAAGTCGAAGAAGCCGGTATCTACATGGCGAAAAATCGCGATGTGTTTGCCAAGGCCTTCAAGAGCCAGCCGGACGCCCTGTCCGA GTTGCTGGTCGACAGCGAGTAATCGCACCGGGTCCTCGCTTGACTCTCCCCTACGGGGCAGACCCTATCCTCAAAGGCCCCCTTTGAAGTTGGCGTCAAG
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DNA Sequence for Gene |
>TR67_RS11215
ATGAGCAAGCGAGTACTGGTGATTCTGGGTCACCCCTGCACTGACAGTTTCTGTGGCGCACTGGCCGACAGCTATATCGAAGCGGCCGTAGCGGCCCGTC ATGATGTTCGCGTAATGCGCTTGGGCGCCCTGCGCTTCGACCCGGTACTGCGTGAAGGCTACAAGCAGATCCAGGCCCTGGAACCTGACTTGCTGGACGC CCAGGCAGACATCACCTGGGCTGAGCACATCGTGTGGGTCTATCCGATTTGGTGGGGCGGGATCCCGGCGCTGCTCAAAGGGTTTCTCGACCGCCTCCTG CTGCCCGGTTTTGCTTTTCAATATCGCAAGGGCAAAGCCTTCCCCGACAAGCTCCTCAAAGGTCGCACCGCCCACCTGCTGGTGACGATGGATACCCCGC CGTGGTACTACAAATGGATTTACCGCATGCCGGGGCTGCATCAAATGCGCAAAACCACATTGGCGTTTTGTGGCATAAAACCCCTCGCAACCCTGACATT TGGCCCGATCCTGGATTCCACGGGCAAACAACGAGATATTTGGCTCCAGCAAGCCCGCGCGCTCGCCACCCGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCCAAATCAGCGGGCAGCCATAAAAAAGGACTTTTATGTATATAGGCAAAGCCGCCCGGCTATCAGGCACCACCGTCAAAAGCATTCGCCACTACGAA GAAATCGGCCTGTTACCCCCGGCGCAACGCCGTGGCGCCTATCGCGTCTACTGCGAGCAAAGCGTTGAACTGCTGATGTTTATCAAATGTGCGCAGCAAC TGGGTTTCAAGCTCAAGGAAATGCAGTCGATCCTTGATGAGCACCGGGGTCGGGCGCTGCCATGGGAAGTGGTGAGCAGCGCCATCGCCAGCAAAAAACA AGCGGTGGCCAGCCAGATCGATGCGTTGCAGCAGGTACATGCCGGGCTGGTCGAATTTGAGAAGCGCTTCAGCCAAGCCGAGGAACAATGCCAGTTGCAG CAAAATCAATGACTGACAGGGCCCCTGCTTACTCCTTGGGGTACAACAACTGCTGCGCCAGTTCATCAGAGACCCGGGCCGGAGAGCGTTTTTCGGCCTG
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Amino Acid Sequence |
>NADPH-quinone reductase
MSKRVLVILGHPCTDSFCGALADSYIEAAVAARHDVRVMRLGALRFDPVLREGYKQIQALEPDLLDAQADITWAEHIVWVYPIWWGGIPALLKGFLDRLL LPGFAFQYRKGKAFPDKLLKGRTAHLLVTMDTPPWYYKWIYRMPGLHQMRKTTLAFCGIKPLATLTFGPILDSTGKQRDIWLQQARALATR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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