Pseudomonas deceptionensis DSM 26521, TR67_RS05705
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas deceptionensis strain DSM 26521 1_1862075_38.8261, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGTAACTGTTGTTGAGCTCCAGCTCAATCTGCACCTCTGGGTATTCACGGGAAAACTCCAGCAACAGCGCATCAAAAAACGTTTCGCCCAAGGACACG GGCACAGTCATACGCACCGGCCCGGCCATGTCGTCCTTTAACCGGGCCAATGCCTGACGTGCCCGCTCCACTTGCACCACCAATGCCTGGGCCTGGGGCA ATAACGCAGCGCCAGCAGCGGTCAGGCTCAAACGCCTGGTGGTGCGGTGCAGCAATACCACCGAAAACCGGTCTTCCAGCAAACTGATGCGCTTGGACAG CTGCCCTTTGCTGCAGCCCAACTGCTGGGCGGCCAAGGTGAAACTGCCCGCATCGATCAACACCGCGAAGGCCGCCAGATCATCCATTTCGCTCATGGAT TGTTTCCATATGAAAACCAAAGGTTGCCTATTAGTGCGCTTATCGCGCTAAAAAACCACTACTAGACTGAGCGCTCACCTCTTCCTTGAAGGAACACAGC
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| DNA Sequence for Gene |
>TR67_RS05705
ATGAAAATCCTGTTGATCGGCGCTAACGGCACCATTGGTTCAGCTATTGATCGCGAGTTGTCACCGCGCCATGAGATCGTGCGTATTGGCCGCAAAAGCG GCGATTTTCAGGTGGATATCAGCGACAGTGCATCGATTCGCAAGCTGTTCGAACAGACCGGGCGCTTCGACGCGCTGATCTGTGCAGCAGGCAACGTCAA CTTTGTGCCGCTGGCCGAGATGAGCGAGAAAGACTTTGCCCTGGGCTTGCAGGACAAATTGATGGGGCAGGTCAACCTGATGCTGATCGGTCGCGAATTC GCCAACGATGGCGCCTCGTTCACCTTCACCAGTGGTGTACTCAACCGCGAGCCGATCCGCACCGGTAGCTCGGCGGCACTGGTCAACGCTGCACTGGACG GCTTTGTAAAAGCGGCAGCCATTGAATTGCCACGCGGGTTGCGGGTGAACTCGGTCAGCCCTACCGTGCTGGCAGAAGCCATGGACAAATACGCACCGTA CTTCCGTGGTTTCAAACCGGTTGCAGCCGCAGATGTGGCGCTGGCCTACGCCAAAAGCGTGGAAGGCTTGCAAACCGGCCAGTCCTACAACGTTGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACTCATCGACACGCCAGGCGCCATCCCACATTCACTTGTGATGCACGGCGAGCCTGAGTAACGTGGCGGCACCAGTCAGGAGTCCCAATGATGCGTGTC GCCCGTCCCTTAGTTTTGCTCGCCCTGCTGCCCGTGTTTGCGGGCTGCCAGATGTTCAGCAGCAAACCCGCCGATACCACCGCAGGCCAGACCCGCCTGC AGGGTGAGCTGGTTTCATCCAATGGCCAGCTAGTGTTCCAACCGTGCGTCGGCCAACAGCGCTATGTGGTACGCGACAGTGCCAACACCTCGCTCGTACA AGACGCTTCGTACATGCCTGACGCACCGGGCAAATTGTTCGCTGATATTCGCGGCAGTTTTGTCGCCAGTAAAGCACCCGGCACTGACGGCGAAGTCGAG TTGCAACAGCTTTATCGCCTGGAACGCAGCAGCACTGCCTGCCAGGACCCCAATTTCAAGCAACTGACCGTTCACGCCAACGGCAATGGCCCGGCGTGGG
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| Amino Acid Sequence |
>short-chain dehydrogenase
MKILLIGANGTIGSAIDRELSPRHEIVRIGRKSGDFQVDISDSASIRKLFEQTGRFDALICAAGNVNFVPLAEMSEKDFALGLQDKLMGQVNLMLIGREF ANDGASFTFTSGVLNREPIRTGSSAALVNAALDGFVKAAAIELPRGLRVNSVSPTVLAEAMDKYAPYFRGFKPVAAADVALAYAKSVEGLQTGQSYNVG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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