Strain | Pseudomonas deceptionensis strain DSM 26521 1_1862075_38.8261, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACGTCCTGTGCCGCGCCAGCCATGATAATCGCTGCGCCGTCGTGACCTCGCGCCTCACTCGCCACGGCGAATGCAGCGCGCTGGTCCTGGAAATCACCGG TAGCTGGGACGCCCTGGCCCGCCTTGAAGCCGGCTTGCCCGCACTGGCCAAAAAGCACGCTTTCAGCGTCAATGTTGTGCGCAGTGCCCCGCTCGAAACC CGCCCGCAAGCTCTGCCGTATGTGGCGTATGTGAGTTCTGCCTACCGCTCGGACATCATCAACGAGCTGTGCCAGTTCTTCATGGACCACAACGTAGAGC TCGAAAACCTGACGTGCGACACCTATCAGGCCCCGCAAACCGGCGGCACCATGCTGAACGCCACGTTCACCGTGACCTTGCCGGCCGGCATTCAGATCAG CTGGTTGCGCGATCAGTTCCTGGACTTCGCCGACGCGTTGAACCTCGATGCGCTGATCGAACCGTGGCGCCCACAGAACCCGATGTAAGGAAGCACACTC
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DNA Sequence for Gene |
>TR67_RS03940
ATGGCCGTTGCAATTGACCAACCCGTAGACGACTTCCAGATCCCGGCAACCAGTGAAAAAACCGTCAGCCTGTCGCAACTCAAGGGCAAGCAGGTGGTGA TTTACTTCTACCCCAAGGACAGCACGCCGGGCTGCACCACTGAGGGCCAGGGCTTTCGCGATCATTACGCCGAGTTTCAGGCAGCCAATACCGAAGTGTT TGGTGTGTCTCGCGACAGCCTCAAGTCCCATGAGAACTTCAAGGCCAAGCAAGGCTTCCCGTTTGAGCTGCTGAGCGACAAGGACGAAGCCCTGTGCCAG CTGTTTGACGTGATCAAGCTGAAAAAGCTGTACGGCAAGGAGTACATGGGCGTTGATCGCAGCACGTTCCTGATCGACAAGGACGGCGTGCTGCGTCACG AGTGGCGCGGCGTGAAAGTGCCGGGCCATGTGGAGGCGGTACTCGAGCAGGCCAAGGCGCTGAATAACGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCGCCTGGCCCTCTCCCTCCGGGAGAGGGCCAGGGTGAGGGGCTTTAGCTTTACTGACGCACCAACCGCACATTCTGGAACTCAACCGTTTCGGTGCTG CGGTACGGGTTGATATCCAGCCCGCCACGTCGCACATAGCGCGCATACACGGTCAACTTCTCGGGTTTGAGCAAACGCTGCAGGTCGAGGAAGATCCGCT CCACGCATTGCTCGTGGAAGTCCGAGTGCTGGCGAAAGCTCACCAGATACGCCAGCAAACTGGCGTGATCCAGCGCCGCGCCGCGGTACTCGACTACTAC GGTGCCCCAGTCCGGCTGACTGGTGACCGGGCAGTTGGATTTGAGCAGATGGCTGTAGACGCTCTCTTCGATCAGCTGCGATTCGTCGCATTTGAGCAAC TCGGGACGCGGCTGTTCGTAATCACTGACGCTGATGTCCAGATCATCAATGCACACACCGGGCAAAACGCCCACACCGTCCGCCTGAACGTCATCCAGGC
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Amino Acid Sequence |
>peroxiredoxin
MAVAIDQPVDDFQIPATSEKTVSLSQLKGKQVVIYFYPKDSTPGCTTEGQGFRDHYAEFQAANTEVFGVSRDSLKSHENFKAKQGFPFELLSDKDEALCQ LFDVIKLKKLYGKEYMGVDRSTFLIDKDGVLRHEWRGVKVPGHVEAVLEQAKALNNG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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