Pseudomonas deceptionensis DSM 26521, TR67_RS00105
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas deceptionensis strain DSM 26521 1_1862075_38.8261, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGGCCGCTTGCGCACCCTGGGCGTCGAGCACCGAGTAAAAGCCTTTGTTACGCCACTCGTTCGGGCCGCTGGCATCGTAAAAAATTCGCGTCGGCGCG ACGGCATCGACGCGGTCGCCCTTGTACACCGGCACTTTGCTTGCCCCCCGGGTGGCGCCCTCCGCGCTCCCCAGGTTCAGCTGGCAGGCCGCGTCATTAC AGGCGTGGCAGGCAACGCATTTTTCAGTAAGGATCGGCTGGATGTCCCGAGTGTAGGAAATCAGCGGGCTAACCAGCGGGGCTTGTGCCAACGCGGTACT GCACACCACCAGCGTCACGGCGCCAGTGAGGAGGCGAAAAAACATGTGCCATTGTCCTGATATCAAAAAATATATCGCGATTCTACCCGTGCAGCACCCG CTTTAACATGAATCAAATTCATGTAAATCAGCAGGCACTCAAATCCCACGCAGGTTTGTTATGCTTTGGCATCTTTTGCATGGCTCTAACAGGTAGTCCT
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| DNA Sequence for Gene |
>TR67_RS00105
ATGTCTGACCGCAGCGCTCGTCTCCAAGCACTTCAGCAAGCCCTCAAAGAGCGCATTCTGATTCTCGATGGCGGCATGGGTACTATGATCCAAAGCTACC GCCTAGAGGAACACGACTATCGTGGCACACGCTTTGCCGACTGGCCGAGCGACGTCAAAGGCAACAACGACCTTTTGATCCTCAGCCGCCCCGATGTGAT CGGTGCCATTGAGAAGGCGTATCTGGATGCCGGTGCCGACATTCTCGAAACCAACACCTTCAACGCCACCCAGGTGTCCCAGGCCGACTACGGCATGCAG GCGCTGGCCTACGAACTAAACGTAGAAGGCGCACGCCTGGCACGCAAAGTGGCCGACGCCAAGACCCTAGAAACCCCGGACAAACCGCGCTTTGTTGCGG GCGTGCTCGGCCCTACCAGCCGTACATGCTCGCTGTCGCCGGACGTGAACAACCCCGGCTACCGCAACGTGACCTTCGATGAACTGGTAGAAAACTACAC CGAGGCCACCAAGGGCCTGATCGAAGGCGGTGCCGACCTGATCCTGATCGAAACCATTTTCGACACACTCAACGCAAAAGCCGCCATTTTCGCCGTACAA GGCGTGTTTGAGGAGCTGGGCGTCGAACTGCCGATCATGATTTCCGGCACCATCACCGATGCCTCCGGCCGTACCCTGTCTGGACAGACCACCGAAGCGT TCTGGAACTCCGTGAGCCACGCCAAGCCGATTTCGGTCGGTTTGAACTGCGCCCTGGGCGCCAGCGAGCTGCGTCCGTATCTCGAAGAGCTGTCGAACAA GGCCAGCACCTACGTCTCGGCTCACCCGAACGCGGGCCTGCCCAACGAATTCGGCGAGTACGACGAACTGCCGTCCGAAACCGCCAAGGTCATTGAAGAG TTCGCCCAAAGCGGCTTCCTGAACATTGTCGGCGGTTGCTGCGGCACCACGCCGGGCCATATCCAGGCCATCGCCAATGCCGTGGCCGGTTACGCCCCGC GCCAGATCCCGGACATTCCGAAGGCCTGCCGCCTTTCGGGTCTGGAGCCGTTCACCATTGACCGCAGCTCGTTGTTCGTCAACGTCGGCGAGCGTACCAA CATCACAGGTTCTGCCCGCTTCGCCCGCCTGATCCGCGAAGACAACTACACCGAAGCCCTTGAAGTGGCGCTGCAACAGGTTGAAGCCGGTGCGCAGATC ATCGACATCAACATGGACGAGGGCATGCTGGACTCGAAGAAGGCCATGGTGACCTTCCTCAATCTGATCGCCGGCGAGCCGGATATCTCTCGCGTACCGA TCATGATCGACTCCTCCAAGTGGGAAGTGATCGAAGCGGGCCTCAAGTGCATCCAGGGCAAGGGCATCGTCAACTCGATCAGCATGAAAGAAGGCGTCGA GCAGTTCAAACATCACGCCAAACTGTGCAAGCGCTATGGCGCCGCAGTGGTAGTGATGGCCTTCGACGAAGCCGGTCAGGCCGACACCGAAGCGCGTAAA AAGGAAATCTGCAAACGCTCCTACGACATTCTGGTCAACGAAGTGGGCTTCCCGCCGGAAGACATCATCTTCGACCCGAACATTTTTGCCGTGGCCACCG GTATTGAAGAACACAACAACTACGCCGTGGACTTCATCAACGCCTGCGCTTATATCCGCGACGAGCTGCCGTATGCCCTGACGTCGGGCGGCGTGTCCAA CGTATCGTTCTCGTTCCGTGGCAACAACCCGGTGCGTGAAGCGATCCACTCGGTGTTTTTGCTGTACGCGATCCGCAACGGCCTGACCATGGGTATCGTC AACGCCGGCCAGCTGGAGATCTACGACCAGATCCCGACCGAGCTGCGCGACGCTGTGGAAGACGTGGTGCTCAACCGCACCCCGGACGCCACCGACAACC TGCTGGCCATTGCCGACAAGTACAAGGGTGATGGCAGCGTCAAGGAAGCCGAGACCGAAGAGTGGCGCGGCTGGGAAGTCAACAAGCGCCTTGAGCACGC ACTGGTCAAGGGCATTACCACCCATATCGTTGAAGACACCGAAGAGTCGCGCCAATCCTTCAAGCGCCCGATCGAAGTGATCGAAGGCCCGCTGATGTCG GGCATGAACATCGTTGGCGACCTGTTTGGCGCCGGTAAAATGTTTTTGCCGCAGGTGGTGAAATCCGCCCGCGTGATGAAACAGGCCGTGGCCCACCTGA TCCCGTTTATCGAGCTGGAAAAAGGCGACAAACCGGAAGCTAAAGGCAAGATCCTGATGGCCACCGTCAAGGGCGACGTGCACGACATCGGCAAGAACAT TGTTGGCGTGGTGCTGGGCTGTAACGGTTACGACATCGTGGACCTGGGCGTGATGGTGCCTGCGGAAAAAATCCTGCAGGTCGCCAAGGAACAGAAGTGC GACATCATCGGCCTTTCCGGCCTGATCACCCCGTCGCTGGATGAAATGGTCCACGTCGCTCGCGAAATGCAGCGTCAGAACTTCTACCTGCCGCTGATGA TCGGCGGCGCGACCACCTCCAAGGCGCACACGGCGGTCAAGATCGAACCCAAGTACCAGAACGATGCCGTGATCTACGTCACCGACGCGTCACGCGCCGT GGGTGTGGCCACACAGTTGCTGTCCAGGGAACTGAAACCCGCATTCGTTGAGAAAACCCGCCTTGAATACATTGAAGTGCGTGAGCGCACCGCCAACCGC AGTGCCCGTACCGAGCGTTTGAGCTACCCGGCCGCCATCGCTAAAAAACCGCAGTTCGACTGGAGCAGCTACCAGCCGGTCAAACCGACCTTCACCGGAG CCAAGGTGCTGGACAACATCGACCTTAAGGTGCTGGCCGAGTACATCGACTGGACCCCGTTCTTTATCTCGTGGGATCTGGCCGGCAAGTTCCCGCGCAT CCTGACCGACGAAGTGGTCGGCGAAGCCGCTACCGCGCTGTATGCCGATGCCCAGGAAATGCTCGCCAAGCTGATCGACGAAAAGCTGATCAGCGCCCGT GCCGTATTCGGTTTCTGGCCAGCCAATCAGGTGAACGATGACGATCTGGAACTGTACGGCGACGATGGTCAACCTTTGGCCAAACTGCATCACTTGCGCC AGCAAATCATCAAGACCGACGGCAAGCCGAACTTCTCGCTGGCCGACTTTGTCGCACCGAAAGACAGCGGCGTAACCGACTACGTCGGTGGCTTTATCAC CACCGCCGGGATCGGCGCCGAAGAAGTGGCCAAGGCCTACCAAGACGCGGGCGACGACTACAACTCGATCATGGTCAAGGCCCTGGCCGACCGTCTGGCC GAGGCCTGCGCCGAATGGCTGCACCAGCAGGTGCGGACCCAATACTGGGGTTATGCCAAGGACGAGCAACTGGGCAACGATGAGCTGATCAAAGAGCAAT ACAGCGGCATCCGCCCTGCCCCCGGCTACCCGGCGTGCCCTGATCACACCGAAAAAGGCACCCTGTTCGCCTTGCTCGACCCCGAAGCAGAAGAAATGCG TGCCGGCAAAAGCGGCGTGTTCCTCACCGAACACTACGCCATGTTCCCGGCAGCAGCGGTCAGCGGCTGGTACTTCGCTCATCCGCAAGCCCAGTACTTT GCGGTGGGCAAGGTCGACAAGGACCAGGTCGACAGCTACACGGCGCGCAAGGGCCAGGAGCTGAGCATCACCGAGCGCTGGCTGGCGCCTAACCTCGGCT ATGACAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTAACCCGGCTACAGACAGCTCCTGCGGGGGCTGTCTGTCAAACCGGCGCAATCTCATCGCGCTCACGCTGCGACAAGCGAGTCAGTAACGCCCGCCGTT CGATTTTCCTCCTCTCAGCCATGGCTTCTATTTCGCGATTGTAGGCGCCACCCAGTTCCGGGTGTTGATCCTGCAGGGCTTCAGCCTCCAACTCATATCG CTGCTCAGCCAGCAAGAATTCTGAGGCGTATTTACGCTGCAGATAGCTCACCCAGTAATCCTGACTGATCAGTTGCTCCATCAAGAGCGGTGATTTTTCT GCCGTAAGCACCTTGATGTAAGCCTCCTCTATATCGTGATCAGTCACGCCAGAAGCGTTTCTGAACAGCATCTGCGTCGGCTGCCTGGGCAAATCCAGGC GTTTGGCCAAACCGATGCGATAGGCCAGACGGATTTCGGCCGGGTCACGTTGAGGGTGCAGGCTGATGGCGCCACGCGCGATCTCTTCCACCTGGCCCAA
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| Amino Acid Sequence |
>methionine synthase
MSDRSARLQALQQALKERILILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLILSRPDVIGAIEKAYLDAGADILETNTFNATQVSQADYGMQ ALAYELNVEGARLARKVADAKTLETPDKPRFVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGADLILIETIFDTLNAKAAIFAVQ GVFEELGVELPIMISGTITDASGRTLSGQTTEAFWNSVSHAKPISVGLNCALGASELRPYLEELSNKASTYVSAHPNAGLPNEFGEYDELPSETAKVIEE FAQSGFLNIVGGCCGTTPGHIQAIANAVAGYAPRQIPDIPKACRLSGLEPFTIDRSSLFVNVGERTNITGSARFARLIREDNYTEALEVALQQVEAGAQI IDINMDEGMLDSKKAMVTFLNLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHAKLCKRYGAAVVVMAFDEAGQADTEARK KEICKRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFINACAYIRDELPYALTSGGVSNVSFSFRGNNPVREAIHSVFLLYAIRNGLTMGIV NAGQLEIYDQIPTELRDAVEDVVLNRTPDATDNLLAIADKYKGDGSVKEAETEEWRGWEVNKRLEHALVKGITTHIVEDTEESRQSFKRPIEVIEGPLMS GMNIVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMVPAEKILQVAKEQKC DIIGLSGLITPSLDEMVHVAREMQRQNFYLPLMIGGATTSKAHTAVKIEPKYQNDAVIYVTDASRAVGVATQLLSRELKPAFVEKTRLEYIEVRERTANR SARTERLSYPAAIAKKPQFDWSSYQPVKPTFTGAKVLDNIDLKVLAEYIDWTPFFISWDLAGKFPRILTDEVVGEAATALYADAQEMLAKLIDEKLISAR AVFGFWPANQVNDDDLELYGDDGQPLAKLHHLRQQIIKTDGKPNFSLADFVAPKDSGVTDYVGGFITTAGIGAEEVAKAYQDAGDDYNSIMVKALADRLA EACAEWLHQQVRTQYWGYAKDEQLGNDELIKEQYSGIRPAPGYPACPDHTEKGTLFALLDPEAEEMRAGKSGVFLTEHYAMFPAAAVSGWYFAHPQAQYF AVGKVDKDQVDSYTARKGQELSITERWLAPNLGYDN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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