Pseudomonas cremoricolorata ND07, LK03_RS17400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas cremoricolorata strain ND07, complete genome. [Details]
DNA Sequence Upstream of Gene
TATCTCTCTGGCACCGCCGCAAGGCACCACGCAGACCAGGGAGAACGCCGTGATGATCGCCACCCGCACGTTGCCCGCAGTGCTGTTCGTCGCAGGTATC GGCTGCATCAGCCTGGCGCAGCCGGTAGTCGCTGCCGGCAATGGCGTGATCGTCATCAACCGCGATGTGCAGCCGCGCGCCGCAGTTCGCCATACCGGCA CCCCAGACCCCTACCCGGCCACGGTCAGTGCCAATCCCTCGCAGCACGTGCTGGCGCAAACCAATGAACTCAGCGACGGCGACTTCGCTTCGGTTGCCAG CGGCACCCGCTTCAACCGGGTACTGACCCCCGACAGCCACGGCAACCTGCCGGGCATGAATGCGGGCCAGGGCCAGTTGCCGGGTGTCGGCGGCGGCTCG GCAGCCGGCGCCTCGGCAGGCAACAGCATTTCCAACACGGTCAATCAAAGCGTCCAGCGCGGCCTGGCCCCGCTGCAGATTCTGACTCGGGGGCAATGAG
DNA Sequence for Gene
>LK03_RS17400
ATGAACGTCCGTCTGCTTTGCCTCATCTGCACCGCGCTCGGCAGCACCAGCGCCCTGGCTGCCTCGCCGGTACAGGACACTGCCCGCATCGATGGCAGCG CCAGTGCCTATCAAGGCAACTTCAGCATCAATCAGGCCGCCGGTGACACTCTGCAGCAGGCCAACGCTCGGTCCATCGCCATCGGCAGCAGTGCCAGCGC CCACACCGCGATCGAGCAGTCCAGCGATTTGGCCGCCAACCCGGCGCGCGACGCCAGCGCCGCGATTACTGGCAATGCCTTCAGCGGCGGCAACGGCTTG TTGGGCGTCAACCAGGCAGCCGGTGCCAGCACCCAGCAAGCCAACAGCGTGCGGATCGGCATCAGTGCCCTCCCACAGCGCATCGACGACAGCATTCTCA GCCAGCAGACAGTAGCGCTGGCCAACAGCTCCGACGCAACGGATCACGCACCAGGCAGCCGCCAGGTCACCCTCGGGGACCAGGCCTTCACCGGCAGCCG TGGGGTCGTCCAGTTGAATCAGAGCGCCGGGGTCGGCAATCGCATGGCCAACACCCTGAGCGTCCGGGTCGCTGATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCATATGGCACCAAGACACATCCCACACTTAACGGCAAACAAGCGGAGAAACACCATGAAACCAACAACGGCACTCAAGCCTCTGGTATTCGCCCTGGC TGCAGTCATGGCAGTGGCAGCACAAGCAGGTGGCTATGGCTCCAATGGCATTGGTGCTGCCGCCAGTGTCAACGACACCCAAAGCAACAGCAACAACTCC AACCTCAATCAAGGGACTCGCAACGACGCCCGGGTCGACAGCTCGGCCAACGGCTCGCAAGGCAACCTGGGCGCCAACGCCGCGGCCGGGGTGGCCAACC AACAGGACAACGCCGCCGCCATCGCCACTGCAGATGAGCGCTTCATCTTCGGCAGTGCATCCGCGTCCACCAACGTCAACCAAGTCAACAGCGGCAACTT CGCTAACAACCACTCGACGTCCAACAGTGCCAGCCTGTCGAACTCGGCCAACGGCACCTCGGGCAACGTTGGGGTCAACGTCACCTCCGGCAGCTACAAC
Amino Acid Sequence
>autotransporter adhesin
MNVRLLCLICTALGSTSALAASPVQDTARIDGSASAYQGNFSINQAAGDTLQQANARSIAIGSSASAHTAIEQSSDLAANPARDASAAITGNAFSGGNGL LGVNQAAGASTQQANSVRIGISALPQRIDDSILSQQTVALANSSDATDHAPGSRQVTLGDQAFTGSRGVVQLNQSAGVGNRMANTLSVRVAD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site